Sequence details bmy_08292 (Coding sequence)

Part of scaffold_355 (Scaffold)

For more information consult the page for scaffold_355 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRPV4 ENSTTRG00000011720 (Bottlenosed dolphin)

Gene Details

transient receptor potential cation channel, subfamily V, member 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011111, Bottlenosed dolphin)

Protein Percentage 91.24%
cDNA percentage 90.84%
Ka/Ks Ratio 0.07929 (Ka = 0.0089, Ks = 0.1127)

TRPV4 ENSBTAG00000000031 (Cow)

Gene Details

transient receptor potential cation channel subfamily V member 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000034, Cow)

Protein Percentage 97.08%
cDNA percentage 94.0%
Ka/Ks Ratio 0.03276 (Ka = 0.0137, Ks = 0.4194)

TRPV4  (Minke Whale)

Gene Details

transient receptor potential cation channel, subfamily V, member 4

External Links

Gene match (Identifier: BACU008384, Minke Whale)

Protein Percentage 98.71%
cDNA percentage 98.4%
Ka/Ks Ratio 0.08794 (Ka = 0.0063, Ks = 0.0711)

Additional orthologs identified in other species via the OPTIC pipeline.

TRPV4 (Human)   Trpv4 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2568 bp    Location:1134017..1111589   Strand:-
Raw sequence 
>bmy_08292
ATGGCGGATCCCAGCGAAGGCCCCCGTGTGGGGCCTGGGGAGGTAGCCGAGCCCCCCGGGGATGAGAGTGGCATCCCCGGCGGGGAGGCCTTCCCCCTCTCTTCGCTGGCCAACCTGTTCGAGGGGGAGGACGGCTCCCCGTCACCCTCTCCGGCTGATAGTGGTCGCCCCGCCGGCCCAGGCGATGGGCGACCAAACCTGCGCATGAAGTTCCAGGGCGCCTTCCGCAAGGGGGTGCCCAACCCCATCGACCTGCTGGAGTCCACCTTGTATGAGTCCTCAGTGGTGCCTGGGCCCAAGAAGGCGCCCATGGACTCGCTCTTTGACTATGGCACCTATCGTCAGCACCCCAGTGACAACAAGCGGAAGCAGCCACAGAGCCCCAAAGCTCCCACACCCCAGCCGCCTCCCATACTCAAAGTCTTCAACCGGCCTATCCTCTTTGACATCGTGTCTCGGGGCTCCACCGCTGACCTGGACGGGCTGCTCCCCTTCTTGCTGACCCACAAGAAGCGGCTGACTGACGAGGAGTTCCGGGAGCCATCCACGGGGAAGACCTGCCTGCCCAAAGCCCTGCTGAATCTGAGCAACGGCCGCAACGACACAATCCCTGTGCTTCTGGACATCGCTGAGCGCACAGGCAACATGCGGGAATTCATCAACTCGCCCTTCCGGGACATCTACTACCGAGGCCAGACCGCCCTGCACATCGCCATCGAGCGCCGCTGCAAACACTATGTGGAGCTCCTGGTGGCCCAAGGTGCCGATGTTCACGCCCAGGCCCGGGGCCGCTTCTTCCAGCCCAAGGATGAGGGAGGCTACTTCTACTTTGGCGAGCTGCCCCTGTCGCTGGCGGCCTGCACCAACCAGCCCCACATCGTCAACTACCTGACAGAGAACCCGCACAAGAAGGCGGACATGCGGCGCCAGGACTCCCGTGGCAACACGGTGCTGCACGCGCTGGTGGCCATCGCTGACAACACTCGCGAGAACACCAAGTTCGTCACCAAGATGTACGACCTGCTGCTGCTCAAGTGCGCCCGCCTCTTCCCCGACAGCAACCTGGAGGCTGTGCTCAACAACGACGGCCTCTCGCCCCTCATGATGGCCGCCAAGACGGGCAAGATCGGGATCTTTCAGCACATCATCCGTCGGGAGGTGACAGATGAGGACACCAGGCATCTGTCCCGCAAGTTCAAGGACTGGGCCTATGGGCCAGTGTATTCCTCACTCTATGACCTCTCCTCCCTGGACACATGTGGGGAAGAGGCCTCTGTGCTGGAGATCCTGGTGTACAACAGCAAGATCGAGAACCGCCACGAGATGCTGGCCGTGGAACCCATCAATGAACTACTTCGGGACAAGTGGCGAAAGTTCGGGGCCGTTTCCTTCTACATCAACGTGGCCTCCTATCTGTGCGCCATGGTCATCTTTACCCTCACCGCCTACTACCAGCCGCTGGAGGGCACTCCGCCATACCCTTACCTCACCACGGTGGACTACCTGAGGCTGGCCGGCGAGATCATCACGCTCTTCACCGGGGTCCTGTTCTTTTTCACCAACATCAAAGACTTGTTCATGAAGAAATGCCCTGGAGTGAATTCTCTCTTCGTCGATGGCTCCTTCCAACTACTCTACTTCATCTACTCTGTGCTGGTGATAGTCTCGGCGGCCCTCTACCTGGCGGGGATTGAGGCCTACCTGGCCGTCATGGTCTTTGCCTTGGTCCTGGGCTGGATGAACGCCCTTTACTTCACCCGTGGGCTGAAGCTGACGGGGACCTATAGCATCATGATCCAGAAGATCCTCTTCAAAGATCTTTTCCGCTTCCTGCTGGTCTACTTGCTCTTCATGATTGGCTACGCTTCAGGTGAGCTCCGGGTGCCCAGCGAGGACCACACCAACTGCACAGTGCCCACGTACCCCTCGTGCCGTGACAGCGAGACCTTCAGCACCTTCCTCCTGGACCTCTTCAAGCTGACCATCGGCATGGGCGACCTGGAGATGCTGAGCAGCACCAAGTACCCCGTGGTCTTCATCATCCTGCTCGTCACCTACATCATCCTCACGTTCGTGCTGCTCCTCAACATGCTCATCGCCCTCATGGGGGAGACGGTGGGCCAGGTGTCCAAGGAGAGCAAGCACATCTGGAAGCTGCAGTGGGCCACCACCATCCTGGACATCGAGCGCTCCTTCCCTGTGTTCCTGAGGAAGGCCTTCCGCTCCGGCGAGATGGTGACAGTGGGCAAGAGCTCGGACGGCACTCCAGACCGCAGGTGGTGCTTCAGGGTGGACGAGGTAAACTGGTCTCACTGGAACCAGAACTTGGGCATCATTAACGAGGACCCCGGCAAGAACGAGAACTACCAGTATTACGGCTTCTCGCACACCGTGGGCCGCCTCCGGAGGGATCGTTGGTCCTCGGTGGTGCCCCGCGTGGTGGAGCTGAGCAAGAACTCGAACCCGGACGAGGTGGTGGTGCCTCTGGACAACGTGGGGAACCCCAGCTGTGACGGCCACCAGAAGAGTTATGCCCCCAGGTGGAGGACTGACGACGCCCCCCTCTAG

Related Sequences

bmy_08292T0 Protein

Length: 856 aa      View alignments
>bmy_08292T0
MADPSEGPRVGPGEVAEPPGDESGIPGGEAFPLSSLANLFEGEDGSPSPSPADSGRPAGPGDGRPNLRMKFQGAFRKGVPNPIDLLESTLYESSVVPGPKKAPMDSLFDYGTYRQHPSDNKRKQPQSPKAPTPQPPPILKVFNRPILFDIVSRGSTADLDGLLPFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSNGRNDTIPVLLDIAERTGNMREFINSPFRDIYYRGQTALHIAIERRCKHYVELLVAQGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVNYLTENPHKKADMRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLLKCARLFPDSNLEAVLNNDGLSPLMMAAKTGKIGIFQHIIRREVTDEDTRHLSRKFKDWAYGPVYSSLYDLSSLDTCGEEASVLEILVYNSKIENRHEMLAVEPINELLRDKWRKFGAVSFYINVASYLCAMVIFTLTAYYQPLEGTPPYPYLTTVDYLRLAGEIITLFTGVLFFFTNIKDLFMKKCPGVNSLFVDGSFQLLYFIYSVLVIVSAALYLAGIEAYLAVMVFALVLGWMNALYFTRGLKLTGTYSIMIQKILFKDLFRFLLVYLLFMIGYASGELRVPSEDHTNCTVPTYPSCRDSETFSTFLLDLFKLTIGMGDLEMLSSTKYPVVFIILLVTYIILTFVLLLNMLIALMGETVGQVSKESKHIWKLQWATTILDIERSFPVFLRKAFRSGEMVTVGKSSDGTPDRRWCFRVDEVNWSHWNQNLGIINEDPGKNENYQYYGFSHTVGRLRRDRWSSVVPRVVELSKNSNPDEVVVPLDNVGNPSCDGHQKSYAPRWRTDDAPL*