Sequence detailsbmy_08292 (Coding sequence)

Part of scaffold_355 (SequenceType object (1))

For more information consult the page for scaffold_355 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRPV4ENSTTRG00000011720 (Bottlenosed dolphin)

Gene Details

transient receptor potential cation channel, subfamily V, member 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011111, Bottlenosed dolphin)

Protein Percentage 91.24%
cDNA percentage 90.84%
Ka/Ks Ratio 0.07929 (Ka = 0.0089, Ks = 0.1127)

TRPV4ENSBTAG00000000031 (Cow)

Gene Details

transient receptor potential cation channel subfamily V member 4

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000034, Cow)

Protein Percentage 97.08%
cDNA percentage 94.0%
Ka/Ks Ratio 0.03276 (Ka = 0.0137, Ks = 0.4194)

TRPV4 (Minke Whale)

Gene Details

transient receptor potential cation channel, subfamily V, member 4

External Links

Gene match (Identifier: BACU008384, Minke Whale)

Protein Percentage 98.71%
cDNA percentage 98.4%
Ka/Ks Ratio 0.08794 (Ka = 0.0063, Ks = 0.0711)

Additional orthologs identified in other species via the OPTIC pipeline.

TRPV4 (Human)   Trpv4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2568 bp    Location:1134017..1111589   Strand:-
Raw sequence 
>bmy_08292
ATGGCGGATCCCAGCGAAGGCCCCCGTGTGGGGCCTGGGGAGGTAGCCGAGCCCCCCGGGGATGAGAGTGGCATCCCCGGCGGGGAGGCCTTCCCCCTCTCTTCGCTGGCCAACCTGTTCGAGGGGGAGGACGGCTCCCCGTCACCCTCTCCGGCTGATAGTGGTCGCCCCGCCGGCCCAGGCGATGGGCGACCAAACCTGCGCATGAAGTTCCAGGGCGCCTTCCGCAAGGGGGTGCCCAACCCCATCGACCTGCTGGAGTCCACCTTGTATGAGTCCTCAGTGGTGCCTGGGCCCAAGAAGGCGCCCATGGACTCGCTCTTTGACTATGGCACCTATCGTCAGCACCCCAGTGACAACAAGCGGAAGCAGCCACAGAGCCCCAAAGCTCCCACACCCCAGCCGCCTCCCATACTCAAAGTCTTCAACCGGCCTATCCTCTTTGACATCGTGTCTCGGGGCTCCACCGCTGACCTGGACGGGCTGCTCCCCTTCTTGCTGACCCACAAGAAGCGGCTGACTGACGAGGAGTTCCGGGAGCCATCCACGGGGAAGACCTGCCTGCCCAAAGCCCTGCTGAATCTGAGCAACGGCCGCAACGACACAATCCCTGTGCTTCTGGACATCGCTGAGCGCACAGGCAACATGCGGGAATTCATCAACTCGCCCTTCCGGGACATCTACTACCGAGGCCAGACCGCCCTGCACATCGCCATCGAGCGCCGCTGCAAACACTATGTGGAGCTCCTGGTGGCCCAAGGTGCCGATGTTCACGCCCAGGCCCGGGGCCGCTTCTTCCAGCCCAAGGATGAGGGAGGCTACTTCTACTTTGGCGAGCTGCCCCTGTCGCTGGCGGCCTGCACCAACCAGCCCCACATCGTCAACTACCTGACAGAGAACCCGCACAAGAAGGCGGACATGCGGCGCCAGGACTCCCGTGGCAACACGGTGCTGCACGCGCTGGTGGCCATCGCTGACAACACTCGCGAGAACACCAAGTTCGTCACCAAGATGTACGACCTGCTGCTGCTCAAGTGCGCCCGCCTCTTCCCCGACAGCAACCTGGAGGCTGTGCTCAACAACGACGGCCTCTCGCCCCTCATGATGGCCGCCAAGACGGGCAAGATCGGGATCTTTCAGCACATCATCCGTCGGGAGGTGACAGATGAGGACACCAGGCATCTGTCCCGCAAGTTCAAGGACTGGGCCTATGGGCCAGTGTATTCCTCACTCTATGACCTCTCCTCCCTGGACACATGTGGGGAAGAGGCCTCTGTGCTGGAGATCCTGGTGTACAACAGCAAGATCGAGAACCGCCACGAGATGCTGGCCGTGGAACCCATCAATGAACTACTTCGGGACAAGTGGCGAAAGTTCGGGGCCGTTTCCTTCTACATCAACGTGGCCTCCTATCTGTGCGCCATGGTCATCTTTACCCTCACCGCCTACTACCAGCCGCTGGAGGGCACTCCGCCATACCCTTACCTCACCACGGTGGACTACCTGAGGCTGGCCGGCGAGATCATCACGCTCTTCACCGGGGTCCTGTTCTTTTTCACCAACATCAAAGACTTGTTCATGAAGAAATGCCCTGGAGTGAATTCTCTCTTCGTCGATGGCTCCTTCCAACTACTCTACTTCATCTACTCTGTGCTGGTGATAGTCTCGGCGGCCCTCTACCTGGCGGGGATTGAGGCCTACCTGGCCGTCATGGTCTTTGCCTTGGTCCTGGGCTGGATGAACGCCCTTTACTTCACCCGTGGGCTGAAGCTGACGGGGACCTATAGCATCATGATCCAGAAGATCCTCTTCAAAGATCTTTTCCGCTTCCTGCTGGTCTACTTGCTCTTCATGATTGGCTACGCTTCAGGTGAGCTCCGGGTGCCCAGCGAGGACCACACCAACTGCACAGTGCCCACGTACCCCTCGTGCCGTGACAGCGAGACCTTCAGCACCTTCCTCCTGGACCTCTTCAAGCTGACCATCGGCATGGGCGACCTGGAGATGCTGAGCAGCACCAAGTACCCCGTGGTCTTCATCATCCTGCTCGTCACCTACATCATCCTCACGTTCGTGCTGCTCCTCAACATGCTCATCGCCCTCATGGGGGAGACGGTGGGCCAGGTGTCCAAGGAGAGCAAGCACATCTGGAAGCTGCAGTGGGCCACCACCATCCTGGACATCGAGCGCTCCTTCCCTGTGTTCCTGAGGAAGGCCTTCCGCTCCGGCGAGATGGTGACAGTGGGCAAGAGCTCGGACGGCACTCCAGACCGCAGGTGGTGCTTCAGGGTGGACGAGGTAAACTGGTCTCACTGGAACCAGAACTTGGGCATCATTAACGAGGACCCCGGCAAGAACGAGAACTACCAGTATTACGGCTTCTCGCACACCGTGGGCCGCCTCCGGAGGGATCGTTGGTCCTCGGTGGTGCCCCGCGTGGTGGAGCTGAGCAAGAACTCGAACCCGGACGAGGTGGTGGTGCCTCTGGACAACGTGGGGAACCCCAGCTGTGACGGCCACCAGAAGAGTTATGCCCCCAGGTGGAGGACTGACGACGCCCCCCTCTAG

Related Sequences

bmy_08292T0 SequenceType object (3)

Length: 856 aa      View alignments
>bmy_08292T0
MADPSEGPRVGPGEVAEPPGDESGIPGGEAFPLSSLANLFEGEDGSPSPSPADSGRPAGPGDGRPNLRMKFQGAFRKGVPNPIDLLESTLYESSVVPGPKKAPMDSLFDYGTYRQHPSDNKRKQPQSPKAPTPQPPPILKVFNRPILFDIVSRGSTADLDGLLPFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSNGRNDTIPVLLDIAERTGNMREFINSPFRDIYYRGQTALHIAIERRCKHYVELLVAQGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVNYLTENPHKKADMRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLLKCARLFPDSNLEAVLNNDGLSPLMMAAKTGKIGIFQHIIRREVTDEDTRHLSRKFKDWAYGPVYSSLYDLSSLDTCGEEASVLEILVYNSKIENRHEMLAVEPINELLRDKWRKFGAVSFYINVASYLCAMVIFTLTAYYQPLEGTPPYPYLTTVDYLRLAGEIITLFTGVLFFFTNIKDLFMKKCPGVNSLFVDGSFQLLYFIYSVLVIVSAALYLAGIEAYLAVMVFALVLGWMNALYFTRGLKLTGTYSIMIQKILFKDLFRFLLVYLLFMIGYASGELRVPSEDHTNCTVPTYPSCRDSETFSTFLLDLFKLTIGMGDLEMLSSTKYPVVFIILLVTYIILTFVLLLNMLIALMGETVGQVSKESKHIWKLQWATTILDIERSFPVFLRKAFRSGEMVTVGKSSDGTPDRRWCFRVDEVNWSHWNQNLGIINEDPGKNENYQYYGFSHTVGRLRRDRWSSVVPRVVELSKNSNPDEVVVPLDNVGNPSCDGHQKSYAPRWRTDDAPL*