Sequence detailsbmy_08294 (Coding sequence)

Part of scaffold_355 (SequenceType object (1))

For more information consult the page for scaffold_355 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TCHPENSTTRG00000005130 (Bottlenosed dolphin)

Gene Details

trichoplein, keratin filament binding

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004836, Bottlenosed dolphin)

Protein Percentage 82.35%
cDNA percentage 84.25%
Ka/Ks Ratio 0.35356 (Ka = 0.0345, Ks = 0.0975)

BT.43244ENSBTAG00000006504 (Cow)

Gene Details

trichoplein keratin filament-binding protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000042791, Cow)

Protein Percentage 90.0%
cDNA percentage 91.2%
Ka/Ks Ratio 0.16595 (Ka = 0.0503, Ks = 0.3033)

TCHP (Minke Whale)

Gene Details

trichoplein, keratin filament binding

External Links

Gene match (Identifier: BACU008385, Minke Whale)

Protein Percentage 96.67%
cDNA percentage 97.57%
Ka/Ks Ratio 0.39242 (Ka = 0.0199, Ks = 0.0507)

Additional orthologs identified in other species via the OPTIC pipeline.

TCHP (Human)   Tchp (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1701 bp    Location:1191652..1208458   Strand:+
Raw sequence 
>bmy_08294
AACGAGCGGGGAAACGGCCAGTGTAGGCGTAGCTCTACCCGGGAGGGTCGCTGTGGGCCAGGCCGGGCTCGGTTGGGGCATGCTGCAGCTCGGGCTGGGACAGCCTTCGAAAATTCCGGGGCGCAGAGAAACATGGCACTCCCCACGCTGCCCTCCTCCTGGTGCAGCCGGAGGCTCCCGGATCAGCAGGCAGCACGACAGCGACGCCGGGAGCAGGAGGCCCAGCTTCGGCAGCAGTGGGATCAGAACAGCCGCTACTTCAAGGTGTCTGACGTCTGCAGCTCCAAACAGGCAGAATGGAGCTCCAAGGCCTCCTACCAGAGGAGCATGCACGCCTACCAGCGGGAGAAGATGAAGGAGGAGGGGAGGAAGCGTCTGGAGGCCCGACGGCAGAGACTCAGGCAGCTTCTGGYGGAGGAGCAGGACCTGCTGGCCAGAGAACTGGAGGAGCTGAGGCTGAGCATGAACTCGAGGGAAAGAAGAATCCGGGAGCAGCACGGGAATCTGAAGTCAGCCCGAGAGGAGCAAAGGAAACTGATTGCTGAACAGCTTTTGTATGAACACTGGAAAAAGAACAACCCCAAACTTCGAGAGGTGAAAACCAAGGAGATCCTTCTTGAGGAAGTTTATTCTCTGCCTTCTCGTCCTCAGATTGAATTGGAACTTCACAAGAAACATGTGATAAACTCTTGGGAAACACAGAAAGAGGAAAAAAAACAGCAAGAAGCCGCCGAAGAGGAAAAGGAAAAACGGTATGAAAATGAATATGAAACAGCCCGACGGGAAGCGCTGGAACGGATGAAAGCAGAAGAGGAGAGGAGGCAACTGGAGGGTAAACTGCAGGCAGACGCGCTGCGCCAGCAGATGGAGGAGCTGAAGGTGAAGGAGATGGAGGCCACCAAACTAAAGAAGGAGCAGGAGAATCTGCTGAAGCAGCGCTGGGAGCTGGAGAGGCTGGAGGAAGAGAGGAAGCAGGTGGCAGCCTTGTGGCAGAAGGCGGAGCTGGGACGCTTTTTGAGACATCAGTATAACGTGCAGCTCAATAGACGTACACAGCAGATCCAAGAGGAACTGGAGGCAGACGGGCGCATCCTGCAGGCGCTGCTGGAGGAGGAGGACGAGAACCAGCGCGCGCACCTGGCCCGGAGGGAGCAGGCCCAGGCCGACGTGGCCTGGATGAAGCGGGTCATCGAGGAGCAGCTGCAACTGGAGAGGGCGCGGGAGGCGGAGCTGCAGATGCTGTTGAGGGAGGAGGCTAAGGAAATGTGGGAAAAGAGAGAGGCAGAGTGGGCCCGCGAGAGGAGTGCTCGAGACCGGCTGATGAGCGAGGTTCTGACAGGGAGACGACAACAAATACAGGAAAAGATTGAACAAAACCGACGGGAGCAAGAGGAATCCCTGAGGCACAGAGAGCAACTGATTCGAGATCTTGAGGAGGCAAGAGAGTCCGCTCATCGTGAGAAAGAGGAGAGCGAAGAACTGAAATCGGCCAGGAAGCAGGAGCTGGAAGCCCAGGTTGCAGAGCGCCAGCTGCAGGCGTGGGAAGCGGACCAGCAGGAGGAGGAGGAGGAAGAAGAGGCGAGGCAGGCAGAGCAGCTCACAGACGCCCTGCTGCGGCAGGAGGCGAAGATGATGGCCGAGCAGGGCTACCGGCCCAAGGACCAAGACCCAAATCCTCCCCTGGCCTACCAGGCCCCATAG

Related Sequences

bmy_08294T0 SequenceType object (3)

Length: 567 aa      View alignments
>bmy_08294T0
NERGNGQCRRSSTREGRCGPGRARLGHAAARAGTAFENSGAQRNMALPTLPSSWCSRRLPDQQAARQRRREQEAQLRQQWDQNSRYFKVSDVCSSKQAEWSSKASYQRSMHAYQREKMKEEGRKRLEARRQRLRQLLXEEQDLLARELEELRLSMNSRERRIREQHGNLKSAREEQRKLIAEQLLYEHWKKNNPKLREVKTKEILLEEVYSLPSRPQIELELHKKHVINSWETQKEEKKQQEAAEEEKEKRYENEYETARREALERMKAEEERRQLEGKLQADALRQQMEELKVKEMEATKLKKEQENLLKQRWELERLEEERKQVAALWQKAELGRFLRHQYNVQLNRRTQQIQEELEADGRILQALLEEEDENQRAHLARREQAQADVAWMKRVIEEQLQLERAREAELQMLLREEAKEMWEKREAEWARERSARDRLMSEVLTGRRQQIQEKIEQNRREQEESLRHREQLIRDLEEARESAHREKEESEELKSARKQELEAQVAERQLQAWEADQQEEEEEEEARQAEQLTDALLRQEAKMMAEQGYRPKDQDPNPPLAYQAP*