Part of scaffold_370 (Scaffold)

For more information consult the page for scaffold_370 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYCP3 ENSTTRG00000017212 (Bottlenosed dolphin)

Gene Details

synaptonemal complex protein 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016315, Bottlenosed dolphin)

Protein Percentage 84.69%
cDNA percentage 89.95%
Ka/Ks Ratio 0.59715 (Ka = 0.0992, Ks = 0.1661)

SYCP3 ENSBTAG00000002492 (Cow)

Gene Details

synaptonemal complex protein 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027778, Cow)

Protein Percentage 77.51%
cDNA percentage 85.81%
Ka/Ks Ratio 0.51378 (Ka = 0.1401, Ks = 0.2726)

SYCP3  (Minke Whale)

Gene Details

synaptonemal complex protein 3

External Links

Gene match (Identifier: BACU020548, Minke Whale)

Protein Percentage 88.57%
cDNA percentage 91.9%
Ka/Ks Ratio 0.78958 (Ka = 0.0845, Ks = 0.1071)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 633 bp    Location:904594..912556   Strand:+
>bmy_08316
ATGGTGCCCTCTGGAAGAAAACATACCGGGAAATCTGGGAAGACATCCATGGAAGATCAGGTTATAAGAGGCTATGACTTTGAGAAAGCAGATAAAAAACATCTGAGTGGTTCAGAGGAGGATGTCACTGAAGGGAAGACTCCAGTACTTGATAAACACGGGAAGAAGAGGACTTCTGCAGGAATAGTTGAAGACATGGGGGGTGAAGTACAGAATATGTTGGAAAGATTTGGAGCTGATATTAACAAGGCTCTTCTTGCCAAGAGAAAAAGACTAGAAATGTATACCAAGGCTTCTCTCAAAACCAGTAACCAGAAAATTGAAAATGTTTGGAAAACCCAACAAGAGCAAAGACTTGAGATATATTTCCTAGAAATCAATAAAGATGTCCTTTTTCCCCTTTTAAATAATAATATGTTTCGACAGCAACAAAAAGTTTTTCAACAGTCTAGAATTGTTCAGAGCCAGAGACTGAAAACAATTAAACAATTATATGAGCAGTTCATAAAGAGTATGGAGGACTTGGAGAAGAATCACGATTATCTACTTACTGGTGCACAAAATGAACTTAGAAAAGAAATGGCTATGTTGCAAAAAAAAATTATGATGGAAACGGTAAGTTATTATATTTAA

Related Sequences

bmy_08316T0 Protein

Length: 211 aa      View alignments
>bmy_08316T0
MVPSGRKHTGKSGKTSMEDQVIRGYDFEKADKKHLSGSEEDVTEGKTPVLDKHGKKRTSAGIVEDMGGEVQNMLERFGADINKALLAKRKRLEMYTKASLKTSNQKIENVWKTQQEQRLEIYFLEINKDVLFPLLNNNMFRQQQKVFQQSRIVQSQRLKTIKQLYEQFIKSMEDLEKNHDYLLTGAQNELRKEMAMLQKKIMMETVSYYI*