Part of scaffold_370 (Scaffold)

For more information consult the page for scaffold_370 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHPT1 ENSTTRG00000017210 (Bottlenosed dolphin)

Gene Details

choline phosphotransferase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016313, Bottlenosed dolphin)

Protein Percentage 92.19%
cDNA percentage 94.42%
Ka/Ks Ratio 0.67005 (Ka = 0.0529, Ks = 0.079)

CHPT1 ENSBTAG00000002490 (Cow)

Gene Details

Cholinephosphotransferase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003236, Cow)

Protein Percentage 95.79%
cDNA percentage 97.08%
Ka/Ks Ratio 0.36368 (Ka = 0.0205, Ks = 0.0563)

CHPT1  (Minke Whale)

Gene Details

choline phosphotransferase 1

External Links

Gene match (Identifier: BACU000929, Minke Whale)

Protein Percentage 96.06%
cDNA percentage 98.03%
Ka/Ks Ratio 0.72429 (Ka = 0.0185, Ks = 0.0256)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 858 bp    Location:945068..908742   Strand:-
>bmy_08317
ATGGCCCCCAACTCCATCACCCTCCTGGGCCTCGCCATCAACCTGCTCACCACGCTCCTGCTCATCTCTTACTGCCCCACGGTCACCGAGGAGGCACCGTACTGGACATACCTTTTATGTGCATTAGGACTCTTCATCTACCAGTCACTGGATGCTATTGATGGGAAACAAGCCAGAAGAACAAATTCTTGTTCTCCTTTAGGGGAACTTTTTGACCATGGTTGTGACTCTCTTTCCACAGTTTTTATGGCAGTTGGAGCTTCAATTGCTGTTCGCTTAGGAACTCATCCTGACTGGTTGTTTTTCTGCTCTTTTATTGGGATGTTCATGTTTTATTGTGCTCACTGGCAGACTTATGTTTCAGGCGTGTTGAGGTTTGGAAAAGTGGATGTAACTGAAATTCAGGTAGCTTTAGTGATCGTCTTTGTGTTGTCTACATTTGGAGGAGCAACAATGTGGGACTATACGATACCCGTCCTAGAAATAAAATTGAAGATCTTACCAGTTCTCGGAGTAGTAGGTGGAGCAATATTTTCCTGTTCAAATTATTTCCATGTTATCCTCCATGGTGGTGTTGGCAAGAATGGATCCACTATAGCAATAGCTCACATGACCAAAAGTGAACTGTATCTTCAAGACACTGTCTTTCTTGGCCCAGGTCTTTTATTTTTAGACCAGTACTTTAATAATTTTGTAGACGAATATGTTGTTCTATGGATAGCAATGGTCATTTCTTCATTTGATATGATGGGGTACTTTAGTGCTTTGTGCCTGCAAATTTCAAGACACCTTCATCTAAGTATCTTCAAGACTTCATGTCATCAAGCACCTGAACAGGTTCACAAGCATATTGACTAA

Related Sequences

bmy_08317T0 Protein

Length: 286 aa      View alignments
>bmy_08317T0
MAPNSITLLGLAINLLTTLLLISYCPTVTEEAPYWTYLLCALGLFIYQSLDAIDGKQARRTNSCSPLGELFDHGCDSLSTVFMAVGASIAVRLGTHPDWLFFCSFIGMFMFYCAHWQTYVSGVLRFGKVDVTEIQVALVIVFVLSTFGGATMWDYTIPVLEIKLKILPVLGVVGGAIFSCSNYFHVILHGGVGKNGSTIAIAHMTKSELYLQDTVFLGPGLLFLDQYFNNFVDEYVVLWIAMVISSFDMMGYFSALCLQISRHLHLSIFKTSCHQAPEQVHKHID*