Part of scaffold_368 (Scaffold)

For more information consult the page for scaffold_368 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NPHP1 ENSTTRG00000003086 (Bottlenosed dolphin)

Gene Details

nephronophthisis 1 (juvenile)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002895, Bottlenosed dolphin)

Protein Percentage 85.17%
cDNA percentage 88.08%
Ka/Ks Ratio 0.72431 (Ka = 0.0377, Ks = 0.0521)

NPHP1 ENSBTAG00000007675 (Cow)

Gene Details

nephrocystin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010098, Cow)

Protein Percentage 87.5%
cDNA percentage 89.15%
Ka/Ks Ratio 0.2002 (Ka = 0.0637, Ks = 0.318)

Genome Location

Sequence Coding sequence

Length: 1299 bp    Location:136049..108234   Strand:-
>bmy_08323
ATGGGACTTGTAGTTTCGGACGCCGCGGGGCATTCTCCCTCATCTCCACCCCAATCCTTTGGGACTGGCGAGAAAAAGGTGAGTAGCTGGGCAGTGAGCTCAGGACCTGGCGGAGCGGCTTCCTCAAGGGAGAATCATCCGCACACTCTTCCCGCACCAGCCAGTCGGGCTGGGAGGCGGGCGCGCGGTGATGGCGTCACCTTCCGGTGCCGCCGTCTTGGTTTCCCTGGCGACCGGCGTGAGCTCGGCGCCGAGGCGAAGGAGATGCTGGCGAGGCGACAGCGCGATCCCCTCCAGTCCCTGCAGCGTCGCAATCAGGAGCTGAAGCAGCAGGTTGATGATTTGCTTTCTGAGAGTCGATTGAAAGGAGCTCTAGAAGCCAGTAAAAGGCGAGATATTTACCAAAGATGTATCCAATTAAAACAGGCAATAGATGAAAATAAAAATGCTCTTCAAAAATTAAGCAAAGCTGATGAACCTGCCCCTGTTGGGAGTTACGATCAGAAGAAAGAGGAGGAACACAATCTTTTGGATAAGCTCACCCACCAACTGCAGGAACTTGCTATGTCCATAAGTAGAGAAAATGTCGCTGAAACTGGGGCGCTTACTGAAGGAGAGGACGATGACAATTCTGCTGAAGAAGATGAAGAAGAAGAAGAAGAAGATGAAGAGACCACAAGTGGAGAATACATTGCTGTTGGAGATTTTACGGCTCAGCAAGTCGGAGACCTTACATTTAAGAAAGGGGAAATTCTCCTTATAATTGAAAAAAACCCTGATGGTTGGTGGATGGCTAAGAACGCCAAAGGAAACAAAGGTCTTATTCCCAGAACCTACTTGGAGCCCTATAATAAAGAAGAAGGCGAGGCGTCTAGTGATGAAGACAGTGAAGAAGATGTAGAGATAGGGGATGAAACGGCAGAAGGAGCAGAAGTTAAACAAAGAACCGATTCTCATTGGAGTGCTGTCCGAAAAGCCATCTCAGAGCAGATAAACACCGTCGACGTATTGACCACGATGGGAGCTATTCCTGCCGGGTTCAGGCCTTCCACCCTCTTCCAGCTTCTGGAGGAAGGGAATCAATTTCGAGCAAGTTACTTCTTACAACCAGCGCTCACTACTTCACAGCTGGCCTTCAGAGATCTAATGTGGGATGCTAAAACGGGCTCTATTAGGTCAAGACCAAGTCGTGTTTCCTTGATTCTGACCCTCTGGAGCTGTAAGATGATTCCTCTTCCAGGASTGAGCATCCAGGTTCTGAGCAGACACGTGCGCTTCTGTCTGTTTGACGGCAATAAG

Related Sequences

bmy_08323T0 Protein

Length: 433 aa      View alignments
>bmy_08323T0
MGLVVSDAAGHSPSSPPQSFGTGEKKVSSWAVSSGPGGAASSRENHPHTLPAPASRAGRRARGDGVTFRCRRLGFPGDRRELGAEAKEMLARRQRDPLQSLQRRNQELKQQVDDLLSESRLKGALEASKRRDIYQRCIQLKQAIDENKNALQKLSKADEPAPVGSYDQKKEEEHNLLDKLTHQLQELAMSISRENVAETGALTEGEDDDNSAEEDEEEEEEDEETTSGEYIAVGDFTAQQVGDLTFKKGEILLIIEKNPDGWWMAKNAKGNKGLIPRTYLEPYNKEEGEASSDEDSEEDVEIGDETAEGAEVKQRTDSHWSAVRKAISEQINTVDVLTTMGAIPAGFRPSTLFQLLEEGNQFRASYFLQPALTTSQLAFRDLMWDAKTGSIRSRPSRVSLILTLWSCKMIPLPGXSIQVLSRHVRFCLFDGNK