Part of scaffold_369 (Scaffold)

For more information consult the page for scaffold_369 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CSF2 ENSTTRG00000006979 (Bottlenosed dolphin)

Gene Details

colony stimulating factor 2 (granulocyte-macrophage)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006597, Bottlenosed dolphin)

Protein Percentage 79.86%
cDNA percentage 84.72%
Ka/Ks Ratio 0.62196 (Ka = 0.1599, Ks = 0.2571)

CSF2 ENSBTAG00000001570 (Cow)

Gene Details

Granulocyte-macrophage colony-stimulating factor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002054, Cow)

Protein Percentage 68.53%
cDNA percentage 78.79%
Ka/Ks Ratio 0.55916 (Ka = 0.2287, Ks = 0.4089)

CSF2  (Minke Whale)

Gene Details

colony stimulating factor 2 (granulocyte-macrophage)

External Links

Gene match (Identifier: BACU013064, Minke Whale)

Protein Percentage 86.59%
cDNA percentage 89.39%
Ka/Ks Ratio 0.32646 (Ka = 0.0854, Ks = 0.2617)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 540 bp    Location:742746..752965   Strand:+
>bmy_08341
ATGTGGCTGCAGAACCTGCTTCTCCTGAGCACCGTGGTCTGCAGCACCTCCGCACCCACCCACCCACCCAGCCCTGCCACCCGGCCCTGGCAGCATGTGGATGCCATCAAGGAGGCCCTGAGCATTCTGAACCACAGTAAAGACTCTGCTGCTGTGATGAAAGAAACAACAGAAGTCATCTCTGAAATGTTTGACTCCCAGGAGCCGACATGCCTGCAGACTCGCCTGGAGCTGTACAAGCAGGGCTTGCGGGGCAGCCTCACTAGCCTCGAGGGCCCCTTGACCATGATGGCCAGCCACTACAAGCAGCACTGCCCCCCCACCCAGGAGCTCTGCTATGGGAAGTTTAGAGAGGGCTTCATCTCCACCCTGAATGAAATCTCTATGAAATATAACGATTACCACATAGAAAAGGACATGCAAGAACTCACCAAAATCTGCCCAAAGCTGAAAGTCCAACCCCTGGAAATGCATACCAACCAGTTTTGGAACCCAGGCAGAAATCAAAGGAAGCTGCAAGAGTCTCAGGCCATGCCCTGA

Related Sequences

bmy_08341T0 Protein

Length: 180 aa      View alignments
>bmy_08341T0
MWLQNLLLLSTVVCSTSAPTHPPSPATRPWQHVDAIKEALSILNHSKDSAAVMKETTEVISEMFDSQEPTCLQTRLELYKQGLRGSLTSLEGPLTMMASHYKQHCPPTQELCYGKFREGFISTLNEISMKYNDYHIEKDMQELTKICPKLKVQPLEMHTNQFWNPGRNQRKLQESQAMP*