Sequence detailsbmy_08347 (Coding sequence)

Part of scaffold_369 (SequenceType object (1))

For more information consult the page for scaffold_369 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC22A5ENSTTRG00000002595 (Bottlenosed dolphin)

Gene Details

solute carrier family 22 (organic cation/carnitine transporter), member 5

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002434, Bottlenosed dolphin)

Protein Percentage 98.03%
cDNA percentage 98.44%
Ka/Ks Ratio 0.26335 (Ka = 0.0091, Ks = 0.0346)

SLC22A5ENSBTAG00000000668 (Cow)

Gene Details

solute carrier family 22 member 5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000035601, Cow)

Protein Percentage 93.72%
cDNA percentage 93.66%
Ka/Ks Ratio 0.14945 (Ka = 0.0304, Ks = 0.2037)

SLC22A5 (Minke Whale)

Gene Details

solute carrier family 22 (organic cation/carnitine transporter), member 5

External Links

Gene match (Identifier: BACU018641, Minke Whale)

Protein Percentage 98.38%
cDNA percentage 98.62%
Ka/Ks Ratio 0.25982 (Ka = 0.0081, Ks = 0.0311)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC22A5 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 1674 bp    Location:1080911..1106344   Strand:+
Raw sequence 
>bmy_08347
ATGCGGGACTACGACGAGGTGACCGCCTTCCTGGGCGAGTGGGGCCCATTCCAGCGCCTCATTTTCTTCCTGCTCAGCGCCAGCATCATCCCCAACGGCTTCAACGGCCTGTCGTCCGTGTTCCTGACGGCGACCCCGGAGCACCACTGTCGGGTGCCGGACACAGCGAACCTGAGCAGCGTGTGGCGCAACCACAGCCTCCCGCTGCAGCTGCAGGACGGCCGCGAGGTGCCTCACAGCTGCCGCCGCTACCGGCTCGCGACGATCGTCAACTTCTCGGCGCTCGGGCTGGAGCCGGGGCGCGACGTGGACCTGGAGCAGCTGGAGCAAGAGGGCTGCCTGGATGGCTGGGAGTTCAACCAGGACATCTACCTGTCCACCATCGTGACCGAGTGGAACCTGGTGTGTGAGGACGACTGGAAGGCCCCGCTCACGGTCTCCTTGTTTTTCGGGGGTGTGCTGGTGGGCTCCTTCATTTCGGGGCAGCTCTCAGACAGGTTTGGTCGGAAGAATGTGCTGTTTGTGACAATGGGCATGCAGACTGGCTTCAGCTTCCTGCAGATCTTCTCGAAGAACTTTGAGATGTTTGCCATGCTGTTTTTCCTTGTAGGCATGGGCCAGATCTCCAACTACGTGGCAGCATTTGTCCTGGGAACAGAAATTCTTGGCAAGTCAGCTCGTATTATATTCTCTACGTTAGGCGTGTGCATATTTTATGCATTTGGCTACATGCTGCTGCCGCTGTTTGCTCACTTCATCAGAGACTGGCGGATGCTTCTGCTGGCGCTTACGGTGCCGGGGGTGCTGTGCTTCCCGCTGTGGTGGTTCATCCCTGAGTCCCCCCGATGGCTTATCTCTCAAGGCCGATTTAAAGAGGCAGAGGTGATCATCCGCAGGGCTGCCAAAATCAATGGGATCGTTGCACCCTCAACCATCTTTGACTCAAGTGAGCTACAAGACCTAAGCTCCAAGAAACAGCAGTCTCACAGCATTCTGGATCTGCTCCGAACCCGGAATATCCGGATGGTCACCATCATGTCCATAATTCTGTGGATGACCATATCAGTGGGCTATTTTGGGCTTTCCCTTGACACTCCTAACTTGCATGGGGATGTCTATTTGAACTGCTTCCTTTCGGCTGTGGTTGAAGTCCCAGCATATGTGTTGGCCTGGCTGCTTCTGCAGCACCTGCCCCGACGCTATTCCATGGCCACCGCCCTCTTCCTGGGTGGCAGCGTTCTTCTCTTCGTGCAGCTGGTGCCCCCAGACTTTTATTATTTGGCTACCATCCTGGTGATGGTGGGTAAGTTTGGAGTCACTGCTGCCTTCTCCATGGTCTACGTGTACACAGCCGAGCTGTACCCCACAGTGGTCAGGAACATGGGYGTGGGAGTCAGCTCCACAGCGTCCCGCCTGGGCAGCATCCTGTCTCCCTACTTCATTTACCTTGGTGCCTACGACCGCTTCCTGCCCTACATTCTCATGGGGAGTCTGACCATCCTGACAGCCATCCTCACCTTGTTCCTCCCAGAGAGCTTCGGCACCCCACTCCCAGACACCATTGACCAGATGCTAAGGGTCAAAGGAATAAAATACAGGCAAACTCCAAGCCACACAAGGATGTTAAAAGATGGTGAAGAAAGCCCCACAGTCCTTAAAAACACAGGCTTCTAA

Related Sequences

bmy_08347T0 SequenceType object (3)

Length: 558 aa      View alignments
>bmy_08347T0
MRDYDEVTAFLGEWGPFQRLIFFLLSASIIPNGFNGLSSVFLTATPEHHCRVPDTANLSSVWRNHSLPLQLQDGREVPHSCRRYRLATIVNFSALGLEPGRDVDLEQLEQEGCLDGWEFNQDIYLSTIVTEWNLVCEDDWKAPLTVSLFFGGVLVGSFISGQLSDRFGRKNVLFVTMGMQTGFSFLQIFSKNFEMFAMLFFLVGMGQISNYVAAFVLGTEILGKSARIIFSTLGVCIFYAFGYMLLPLFAHFIRDWRMLLLALTVPGVLCFPLWWFIPESPRWLISQGRFKEAEVIIRRAAKINGIVAPSTIFDSSELQDLSSKKQQSHSILDLLRTRNIRMVTIMSIILWMTISVGYFGLSLDTPNLHGDVYLNCFLSAVVEVPAYVLAWLLLQHLPRRYSMATALFLGGSVLLFVQLVPPDFYYLATILVMVGKFGVTAAFSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFIYLGAYDRFLPYILMGSLTILTAILTLFLPESFGTPLPDTIDQMLRVKGIKYRQTPSHTRMLKDGEESPTVLKNTGF*