Part of scaffold_365 (Scaffold)

For more information consult the page for scaffold_365 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DERL1 ENSTTRG00000015662 (Bottlenosed dolphin)

Gene Details

derlin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014838, Bottlenosed dolphin)

Protein Percentage 88.5%
cDNA percentage 88.33%
Ka/Ks Ratio 0.19067 (Ka = 0.0031, Ks = 0.0161)

BT.8261 ENSBTAG00000020693 (Cow)

Gene Details

derlin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044932, Cow)

Protein Percentage 87.5%
cDNA percentage 84.83%
Ka/Ks Ratio 0.22011 (Ka = 0.0987, Ks = 0.4484)

DERL1  (Minke Whale)

Gene Details

derlin 1

External Links

Gene match (Identifier: BACU013216, Minke Whale)

Protein Percentage 77.5%
cDNA percentage 81.0%
Ka/Ks Ratio 0.52253 (Ka = 0.1858, Ks = 0.3555)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 603 bp    Location:701031..717994   Strand:+
>bmy_08362
ATTTGGAGGCCGATTACTGCCACCTTTTATTTCCCTGTGGGTCCAGGAACTGGATTTCTTTATTTGGTCAATTTATATTTCTTATATCAGTACTCTACACGACTCGAAACAGGAGCTTTCGATGGGAGGCCAGCAGACTATTTATTCATGCTCCTCTTTAACTGGATTTGCATCGTGATTACTGGCTTAGCAATGGATATGCAGTTGCTGATGATTCCTCTGATCATGTCAGTACTTTATGTCTGGGCCCAGCTGAACAGAGACATGATTGTATCATTTTGGTTTGGAACACGATTTAAGGCCTGTTATTTACCTTGGGTTATCCTTGGATTCAACTATATCATYGGAGGCTCGGTCATCAATGAGCTAATTGGAAATCTTGTTGGACATCTTTATTTCTTCCTCATGTTCAGATACCCAATGGACTTGGGAGGAGGGAATTTTCTATCCACGCCTCAGTTTTTGTACCGCTGGCTGCCCAGCAGGAGAGGAGGGGTGTCAGGGTTTGGTGTGCCCCCCGCTAGCATGAGGCGAGCCGCCGACCAGAATGGCGGAGGCGGGAGACACAACTGGGGACAGGGCTTTAGGCTCGGGGACCAGTGA

Related Sequences

bmy_08362T0 Protein

Length: 201 aa      View alignments
>bmy_08362T0
IWRPITATFYFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDMQLLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHLYFFLMFRYPMDLGGGNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGGGRHNWGQGFRLGDQ*