Part of scaffold_364 (Scaffold)

For more information consult the page for scaffold_364 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LMAN2 ENSTTRG00000009573 (Bottlenosed dolphin)

Gene Details

lectin, mannose-binding 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009073, Bottlenosed dolphin)

Protein Percentage 96.94%
cDNA percentage 96.74%
Ka/Ks Ratio 0.24515 (Ka = 0.0217, Ks = 0.0885)

LMAN2 ENSBTAG00000008034 (Cow)

Gene Details

vesicular integral-membrane protein VIP36 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010569, Cow)

Protein Percentage 93.96%
cDNA percentage 91.94%
Ka/Ks Ratio 0.11448 (Ka = 0.0364, Ks = 0.3179)

LMAN2  (Minke Whale)

Gene Details

lectin, mannose-binding 2

External Links

Gene match (Identifier: BACU002877, Minke Whale)

Protein Percentage 91.92%
cDNA percentage 92.02%
Ka/Ks Ratio 0.27053 (Ka = 0.0223, Ks = 0.0823)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1008 bp    Location:203914..223750   Strand:+
>bmy_08378
ATGGCGACGGCGGCGGCGGTGGCGGCGGCGGCAGGCTGGGTTTGGCGCTGGGGCTGGGGCCGGCGATGCTCGGGGAGGCCTGGGCTTCCCGGCCCCGGCCCTGGCCCCACTACACTTCTACTTTTTCTCTTGTTTCTGGGGCCGGTGGCTGCCGACATAACTGACGGCAACAGTGAACACCTGAAACGGGAGCATTCGCTCATCAAGCCCTACCACGGGGTCGGTTCCAGCTCCACGCTCCTCTGGGACTTCCAAGGCAGCACAATGCTCACGAGCCAGTACGTGCGTCTGACCCCTGACGAGCGCAGCAAAGAGGGCTCTATCTGGAACCACCTGCCTTGCTTCCTCAAGGACTGGGAGATGCACGTTCACTTCAAAGTCCATGGCGCAGGGAAGAAGAATCTCCATGGTGACGGCATTGCCTTGTGGTATACCCGGGACCGCCTGGTGCCAGGGCCTGTGTTTGGAAGCAAAGACAACTTCCATGGCTTAGCCATCTTCCTGGACACGTATCCCAATGATGAGACCACAGAGCGTGTGTTCCCRTACATCTCCGTGATGGTGAACAATGGCTCCCTGTCCTACGACCACAGCAAGGATGGCCGCTGGACCGAGCTGGCAGGCTGCACGGCTGACTTCCGCAACCGCGATCACGACACCTTCCTGGCCGTGCGCTACTCCCGGGGTCGCCTGACGTTGGACCCAGGCCTTTCTCAAGTCTCCTCAGACAATCATGACATCATCTCCATGAAGCTGTTCCAGCTGATGGTGGAGCACACACCTGACGAGGAGAACATTGACTGGACCAAGATCGAGCCCAGCGTCAACTTGCTCAAGTCGCCCAAAGACAACGTGGACGACCCGACGGGGAACTTCCGCAGCGGGCCCCTGACGGGGTGGCGGGTGTTCCTGCTGCTGCTCTGTGCCCTCCTGGGCATCATCGTGTGTGCCGTGGTGGGGGCTGTGGTGTTTCAGAAGCGGCAGGAGCGGAACAAGCGTTTCTACTGA

Related Sequences

bmy_08378T0 Protein

Length: 336 aa      View alignments
>bmy_08378T0
MATAAAVAAAAGWVWRWGWGRRCSGRPGLPGPGPGPTTLLLFLLFLGPVAADITDGNSEHLKREHSLIKPYHGVGSSSTLLWDFQGSTMLTSQYVRLTPDERSKEGSIWNHLPCFLKDWEMHVHFKVHGAGKKNLHGDGIALWYTRDRLVPGPVFGSKDNFHGLAIFLDTYPNDETTERVFPYISVMVNNGSLSYDHSKDGRWTELAGCTADFRNRDHDTFLAVRYSRGRLTLDPGLSQVSSDNHDIISMKLFQLMVEHTPDEENIDWTKIEPSVNLLKSPKDNVDDPTGNFRSGPLTGWRVFLLLLCALLGIIVCAVVGAVVFQKRQERNKRFY*