Part of scaffold_364 (Scaffold)

For more information consult the page for scaffold_364 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSPAN17 ENSTTRG00000014024 (Bottlenosed dolphin)

Gene Details

tetraspanin 17

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013300, Bottlenosed dolphin)

Protein Percentage 53.49%
cDNA percentage 61.5%
Ka/Ks Ratio 0.29154 (Ka = 0.4601, Ks = 1.5781)

TSPAN17 ENSBTAG00000017451 (Cow)

Gene Details

Tetraspanin-17

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023198, Cow)

Protein Percentage 97.64%
cDNA percentage 95.8%
Ka/Ks Ratio 0.05047 (Ka = 0.0101, Ks = 0.2007)

TSPAN17  (Minke Whale)

Gene Details

tetraspanin 17

External Links

Gene match (Identifier: BACU002868, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.34%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0326)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 909 bp    Location:912292..901196   Strand:-
>bmy_08392
GGCCCGACGGGCGCTCTGGGTGGCGGCGGTCATGAAGCCGCAGCCGCCGGGCTAGGCCCCGGGCGGCTCCAGCCCTGGGCGGCCCGCAGAGGGCTGGGCCCAGCCCCCGGCTCCGGTTCCCGGGCCGGCGGGCGGCCGCTCACCATGCCCGGCAAGCACCAGCACTTCCAGGAACCCGAGGTCGGCTGCTGCGGGAAATACTTCCTGTTTGGCTTCAACATCGTCTTCTGGGTGCTGGGAGCCCTGTTCCTGGCCATTGGTCTCTGGGCCTGGGGTGAGAAGGGTGTTCTCTCCAACATCTCGGCGCTGACAGATCTGGGAGGCCTTGACCCCGTGTGGCTGTTTGTAGTGGTAGGCGGCATCATGTCGGTGCTGGGCTTTGCCGGCTGCATTGGGGCCCTCCGGGAGAACACCTTCCTGCTCAAGTTTTTCTCCGTGTTTCTTGGCCTCATCTTCTTCCTGGAGCTGGCAACAGGGATCCTGGCCTTCGTTTTCAAGGACTGGATTCGAGACCAGCTCAACCTCTTCATCAACAACAATGTCAAGGCCTATCGGGACGACATTGACCTCCAGAACCTCATTGACTTTGCTCAGGAATACTGGTCTTGCTGCGGAGCCCGAGGGCCCAACGACTGGAACCTCAATATCTACTTCAACTGCACTGACGTGAACCCGAGCCGGGAACGCTGCGGGGTGCCCTTCTCCTGCTGCGTCAGGGACCCTGTGGAGCTGGAGCAGCAGGGCTTCATCCACACCAAAGGCTGCGTGGGCCAGTTTGAAAAGTGGCTGCAGGACAACCTGATCATCGTGGCTGGGATCTTTGTGGGCATCGCCCTCCTCCAGATCTTTGGTATCTGCCTGGCCCAGAACCTCGTGAGTGACATCAAGGCAGTGAAGGCCAACTGGTGA

Related Sequences

bmy_08392T0 Protein

Length: 303 aa      View alignments
>bmy_08392T0
GPTGALGGGGHEAAAAGLGPGRLQPWAARRGLGPAPGSGSRAGGRPLTMPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGIMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDWIRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDVNPSRERCGVPFSCCVRDPVELEQQGFIHTKGCVGQFEKWLQDNLIIVAGIFVGIALLQIFGICLAQNLVSDIKAVKANW*