Sequence detailsbmy_08402 (Coding sequence)

Part of scaffold_364 (SequenceType object (1))

For more information consult the page for scaffold_364 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NOP16ENSTTRG00000005404 (Bottlenosed dolphin)

Gene Details

NOP16 nucleolar protein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005099, Bottlenosed dolphin)

Protein Percentage 39.02%
cDNA percentage 52.03%
Ka/Ks Ratio 0.53351 (Ka = 0.7871, Ks = 1.4754)

NOP16ENSBTAG00000010734 (Cow)

Gene Details

Nucleolar protein 16

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000014212, Cow)

Protein Percentage 96.75%
cDNA percentage 94.04%
Ka/Ks Ratio 0.08975 (Ka = 0.0188, Ks = 0.2092)

Additional orthologs identified in other species via the OPTIC pipeline.

NOP16 (Human)   Nop16 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 372 bp    Location:1154881..1158934   Strand:+
Raw sequence 
>bmy_08402
ATGCCTAAAGCCAAGGGGAAGACTCGGAGGCAGAAGTTCGGTTATAATGTTAACAGGAAGCGTCTGAACCGGAATGCTCGACGGAAGGCAGCGCCGCGGATCGAATGCTCCCACATCCGACATGCCTGGGACCAGACCAAATCGGTGCGGCAGAACCTGGCCGATATGGACCTGGAGGCAGAAGCCAGCCTTCCAGAAAAGAAAGGAAATACGCTATCTCGGGATCTCATTGACTATGTTTGTTACATGGTGGAGAACCATGGGGAGGACTATAAGATTCGGAATAAGATCAACGTCTATAAGCGTTTTTACCCAGCGGAGTGGCAAGCCTTTGTCGATTCTTTGCAAAAGAATAAGATGGAGGTTGAGTGA

Related Sequences

bmy_08402T0 SequenceType object (3)

Length: 124 aa      View alignments
>bmy_08402T0
MPKAKGKTRRQKFGYNVNRKRLNRNARRKAAPRIECSHIRHAWDQTKSVRQNLADMDLEAEASLPEKKGNTLSRDLIDYVCYMVENHGEDYKIRNKINVYKRFYPAEWQAFVDSLQKNKMEVE*