Sequence detailsbmy_08405 (Coding sequence)

Part of scaffold_364 (SequenceType object (1))

For more information consult the page for scaffold_364 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SIMC1ENSTTRG00000005352 (Bottlenosed dolphin)

Gene Details

SUMO-interacting motifs containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005039, Bottlenosed dolphin)

Protein Percentage 96.85%
cDNA percentage 98.11%
Ka/Ks Ratio 0.7715 (Ka = 0.0167, Ks = 0.0217)

C5ORF25ENSBTAG00000034998 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020753, Cow)

Protein Percentage 86.2%
cDNA percentage 90.8%
Ka/Ks Ratio 0.53092 (Ka = 0.0792, Ks = 0.1491)

Additional orthologs identified in other species via the OPTIC pipeline.

SIMC1 (Human)   Simc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2166 bp    Location:1243597..1225582   Strand:-
Raw sequence 
>bmy_08405
GACTTCATTGACTTAACTAGAGAAACCAGACCAAGGGCAAAGGATCGCAATGGACTCTGTGTGATTGACCTAACAGGATCTGAGGAAGAAAATAGACCTATTGCCACTCTTGACTTGACTCTAGAACCTGTTGCTCCTTCCCAGAAAGAGCCAGCCAGTCTTCAAGCATGTGCCAGCCTCTCCAGCAAAGAGGTGATGGAAGGGCGGGTAGACAGAAGCTCTCGGCCTGCAGCACGGAGAATCATTAACAGTGATCCTGTGGATTTGGACCTTTTGGAAGAAACTGCATTTGAAGGTCCCCAACCCCCTACGTCCATCAGTGGGGACTCTGTTTATCCAGGAGAGCCGAATTGTAGCTCAACCATATTCAAAGGTGACCTCGGCTTCTTGGCAAGCCTACAGCTATCTTCAGATATTCACTCCCTCCCCGCAACAAGCAATAATGGTAGCCGTAGCAATCAAAGGGCACCCTTGCCATGCCCACAGCAAGATGTGCCTTGCCCTCCACAAGCCTTGCCATGCCCACTGAGAGCCTTGCCATGCCCACTGCGAGCCTCATCATGTCCACCACGAGCCTCCTCATGCCCACCACGAGCCTTGTCATGCCCATCACAAACCATGCAGTGCCAACTACAAACTTTGCCTCACCTGCCTCAAGAAGGGCCATGCCCTCCTCAAGATGTGCCATGCCCTCAGAATGTGCCATGCGCTCAGCAGAATATGCCAAGTCCACCTCAAGACTCATCATGGCAACTTCAACACTCACAAAGCCCACCTCAAGACTCACTGTGTCCACCTCAAGACTCACTGGGCCTACCTCAAGATGTACCAGGCCCACCTCAAAACATAACGTATCCACAAGATGTGGCACACCTGCAAGACATGCCACAGTCCCTGGGAGACATGCCACAGTCACCAGGAGATATGCTACAATCATCAGGAGACAGGCCACAGTCATCAGGAGACGTGCCCCAGTCACCAAGAGATGTGCCACAGTCACCAGCAGATGTCCTACAGTCACCAGCAGATGTGTCACAGTCACCAGCCAATGTACCACAGTCACCAAGAGACACTCCACCGTCACCAGGAAGTGTACCACATTCATCTGGAGAAGTCCCACACTTATCAGGAGATGTGCTACATTCACCTGGGGACATGTCATGCTTGCCAGAAGACATGCCACACACACTTGGAGACTTGCCTCATTTACCAAAACTCAGGCCTGACTCTCCGCAAAATGATGTACAGAACCATGACACCCCTATGGATGTCTCAGCTCCATCCTCTCCAAGCTGCTCTCCCAGMCCACAGTCTCCACAGTTTGAAACTTCCTTAGAGAAAGTTCCTTGGCTCTCTGTCACAGAAACTCCAGCCAGAAAAAAGATATCATTGTCAGAGCCTGTCAACCCCGGATCTACCCAGGTGCAAGCACGAACACCACAAGGTGGGTTGTACAACAGACCATGCCTGCATAGACTGAAGTACTTCTTACGACCTCCGGTGCATCACCTCTTCTTCCAGACACTAATACCAGATAAAGACACAAGAGAGAACAAAGGTCAAAAATTAGAACCTATCCCTCATCGAAGACTAAGGATGGTAACAAACACCATTGAAGAAAACTTTCCCCTGGGGACTGTGCAGTTTTTGATGGACTTTGTGTCACCCCAGCATTACCCACCCAGAGAAATTGTGGCTCACATCATCCAGAAAATCCTGCTCAGTGGCTCTGAGACTGTGGATGTTCTAAAGGAGGCCTACATGCTTCTCATGAAAATTCAACAGCTACATCCAGCTAATGCCAAGATGGTGGAGTGGGACTGGAAGCTGCTCACTTATGTCATGGAGGAAGAGGGACAAAATCTGCCCGGGCGAGCCCTTTTTCTACGTTATGTAGTACAGACCCTGGAAGATGATTTCCAACAGATCCTGAGGAAGCAGCGACAGCACCTGCAGCAATCTATTGCAAGCACTGTGCTATCCTGTGACAAGCAACCCCACAATGTCAGGGATGTCATCAAGTGGTTGGTCAAAGCAGTAACTGAAGACAGATTAACTCAGTCCCCAAAGGAGAATCAAACCTCTCCAGGAACAGGAATCTTGAAGGCCAGCAGTAGCCACCCTTCTCCCCAACCTAACCTGACAAAGAACAGCAATCAGCTGTAA

Related Sequences

bmy_08405T0 SequenceType object (3)

Length: 722 aa      View alignments
>bmy_08405T0
DFIDLTRETRPRAKDRNGLCVIDLTGSEEENRPIATLDLTLEPVAPSQKEPASLQACASLSSKEVMEGRVDRSSRPAARRIINSDPVDLDLLEETAFEGPQPPTSISGDSVYPGEPNCSSTIFKGDLGFLASLQLSSDIHSLPATSNNGSRSNQRAPLPCPQQDVPCPPQALPCPLRALPCPLRASSCPPRASSCPPRALSCPSQTMQCQLQTLPHLPQEGPCPPQDVPCPQNVPCAQQNMPSPPQDSSWQLQHSQSPPQDSLCPPQDSLGLPQDVPGPPQNITYPQDVAHLQDMPQSLGDMPQSPGDMLQSSGDRPQSSGDVPQSPRDVPQSPADVLQSPADVSQSPANVPQSPRDTPPSPGSVPHSSGEVPHLSGDVLHSPGDMSCLPEDMPHTLGDLPHLPKLRPDSPQNDVQNHDTPMDVSAPSSPSCSPXPQSPQFETSLEKVPWLSVTETPARKKISLSEPVNPGSTQVQARTPQGGLYNRPCLHRLKYFLRPPVHHLFFQTLIPDKDTRENKGQKLEPIPHRRLRMVTNTIEENFPLGTVQFLMDFVSPQHYPPREIVAHIIQKILLSGSETVDVLKEAYMLLMKIQQLHPANAKMVEWDWKLLTYVMEEEGQNLPGRALFLRYVVQTLEDDFQQILRKQRQHLQQSIASTVLSCDKQPHNVRDVIKWLVKAVTEDRLTQSPKENQTSPGTGILKASSSHPSPQPNLTKNSNQL*