Part of scaffold_375 (Scaffold)

For more information consult the page for scaffold_375 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

KDM1B ENSTTRG00000007141 (Bottlenosed dolphin)

Gene Details

lysine (K)-specific demethylase 1B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006759, Bottlenosed dolphin)

Protein Percentage 94.53%
cDNA percentage 96.18%
Ka/Ks Ratio 0.56655 (Ka = 0.0329, Ks = 0.058)

KDM1B ENSBTAG00000014608 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019452, Cow)

Protein Percentage 97.44%
cDNA percentage 94.81%
Ka/Ks Ratio 0.06733 (Ka = 0.0121, Ks = 0.18)

KDM1B  (Minke Whale)

Gene Details

lysine (K)-specific demethylase 1B

External Links

Gene match (Identifier: BACU017615, Minke Whale)

Protein Percentage 99.49%
cDNA percentage 99.26%
Ka/Ks Ratio 0.13074 (Ka = 0.0024, Ks = 0.0186)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1758 bp    Location:473170..526998   Strand:+
>bmy_08415
ATGGCAGACCAGCAGCTCCCCTACTGGGTTCAATGTACAAAACCTGAGTGTAGAAAATGGAGGCAACTTACCAAGGAAATCCAGCTGACTCCACAGATAGCAAAGACGTACCGATGTGGTATGAAACCAAATACTGCTGTTAAGAGAGTGTCGGAAGTTTCCAACCATTGGTGGTACTCCATGCTCATCCTACCTCCTTTGCTGAAAGATAGCGTGGCAGCACCCCTGCTCTCTGCCTACTACCCCGACTGCGTTGGCATGAGCCCGTCCTGCACCAGCACACACCGCGCGGCCAGCGACACCAGTCCTGGGAAGCTGGAGCACTCCAAGGCAGTCCCCTCTGTGCTGGTTCCAGGCATGAACCGGTACTTCCAGCCTTTCTACCAGCCCAACGAGTGCGGCAAAGCCTTGTGCGTGAGGCCAGACGTGATGGAGCTGGATGAGCTCTATGAGTTCCCAGAGTATTCCCGAGACCCCACCATGTACCTGGCTCTGAGGAACCTCATCCTTGCCCTGTGGTATACTAACTGCAAGGAAGCTCTTACTCCTCAGAAATGTATTCCTCACATCATCGTCCGGGGTCTCGTGCGCATCCGATGTGTTCAGGAAGTGGAGAGGATACTTTATTTTATGACGAGGAAAGGTCTCATCAACACAGGAGTTCTCACTGTCGGCACTGACCAGCATCTTCTTCCTAARGATTACCACAACAAATCAGTCATCATTATTGGGGCTGGTCCAGCAGGATTAGCAGCTGCTAGGCAACTGTATAACTTTGGAATTAAGGTGACTGTCCTGGAGGCCAAAGACAGAATTGGAGGCCGAGTGTGGGATGATAAGTCTTTCACAGGCGTCACAGTGGGACGAGGAGCCCAGATTGTCAACGGCTGTATTAACAACCCAGTAGCACTCATGTGTGAACAACTTGGCATCAGCATGCATAAATTTGGAGAAAGATGTGACTTAATTCAGGAAGGTGGAAGAATAACTGACCCCACTATTGACAAGCGCATGGATTTTCATTTTAATGCTCTCTTGGATGTGGTCTCTGAGTGGAGGAAGGATAAGACTCAGCTCCAAGATGTCCCTTTAGGAGAAAAGATAGAGGAGATCTACAAAGCTTTTATTAAGGAGTCTGGAATCCAATTCAGTGAGCTGGAGGAGCAGGTCCTTCAGTTCCATCTCAGTAACCTGGAATATGCCTGTGGCAACAACCTCCATCAGGTGTCTGCTCGCTCCTGGGACCACAATGAATTCTTTGCCCAGTTTGCCGGTGACCACACCCTCCTCACTCCCGGATACTCCGTCATCTTGGAAAAACTGGCAGAGGGACTGGACATTCGGCTCAGATCTCCAGTGTTAGTGACTGTGCCCCTGGCCTTACTGCAGAAAGGTTCCCTTCAGTTTAATCCACCGTTGTCAGACAAGAAGATGAAGGCTATCAACAGCTTAGGTGCAGGTATCATTGAAAAGATTGCCTTGCAATTTCCCTATAGATTTTGGGACAGTAAAGTTCAAGGGGCTGACTTTTTTGGTCACGTTCCTCCTAGTGCCAGCAAGCGAGGGCTTTTTGCCGTGTTCTATGACATGGATCCCCAGAAGCAGCACAGCGTGTTGATGTCGGTGATCGCGGGGGAGGCGGTGGCGGCCGTCAGGAGCCTGGAGGACAAGCAGGCAACAAACAGGCATTTTCCACAAACTGTTACAGGGGCATATTTGAGTGGTGTTCGAGAAGCAAGCAAGATTGCGGCATTTTAA

Related Sequences

bmy_08415T0 Protein

Length: 586 aa      View alignments
>bmy_08415T0
MADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAVKRVSEVSNHWWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTHRAASDTSPGKLEHSKAVPSVLVPGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSRDPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLINTGVLTVGTDQHLLPKDYHNKSVIIIGAGPAGLAAARQLYNFGIKVTVLEAKDRIGGRVWDDKSFTGVTVGRGAQIVNGCINNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKRMDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQFSELEEQVLQFHLSNLEYACGNNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVILEKLAEGLDIRLRSPVLVTVPLALLQKGSLQFNPPLSDKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKQHSVLMSVIAGEAVAAVRSLEDKQATNRHFPQTVTGAYLSGVREASKIAAF*