Part of scaffold_375 (Scaffold)

For more information consult the page for scaffold_375 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF144B ENSTTRG00000007152 (Bottlenosed dolphin)

Gene Details

ring finger protein 144B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006765, Bottlenosed dolphin)

Protein Percentage 97.61%
cDNA percentage 98.07%
Ka/Ks Ratio 0.31307 (Ka = 0.01, Ks = 0.032)

BT.66635 ENSBTAG00000009055 (Cow)

Gene Details

E3 ubiquitin-protein ligase RNF144B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011931, Cow)

Protein Percentage 95.56%
cDNA percentage 92.95%
Ka/Ks Ratio 0.08899 (Ka = 0.0199, Ks = 0.2235)

RNF144B  (Minke Whale)

Gene Details

ring finger protein 144B

External Links

Gene match (Identifier: BACU017614, Minke Whale)

Protein Percentage 85.17%
cDNA percentage 89.77%
Ka/Ks Ratio 0.87977 (Ka = 0.1037, Ks = 0.1179)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 882 bp    Location:671467..736968   Strand:+
>bmy_08417
ATGACCGCTGCCGAAAATCCCACAYGTGGAGACCTAGCTCTGGCCCCCCTCGTCACTTGCAAACTCTGCCTGTGTGAACAGTCTCTGGACAAGATGACCACGCTCCAGGAATGCCGGTGCATCTTTTGCACAGCTTGTCTGAAACAGTACATGCAGCTGGCAATCCGAGAAGGATGTGGGTCTCCCATCACTTGCCCAGACATGGTGTGCCTAAACCACGGGACCCTACAGGAAGCTGAGATTGCCTGTTTGGTATCTGTGGATCAGTTTCAGCTTTATCAGCGGTTAAAATCTGAACGAGAAGTTCACCTGGACCCCTACAGAATGTGGTGTCCTGTCGCAGACTGTCAGACAGTATGCCCCGTCGCATCAAGTGAGCCAGGACAGCCCGTGCTCGTGGAGTGCCCTTCTTGCCACCTGAAGTTCTGCTCGTGCTGCAAGGATGCTTGGCATGCAGAGGTCTCCTGCAGAGACAGTCAGCCTAGCATCCTGCCAACAGAGCACGGGACCCTCTTCGTGATGGAGGCAGAAGCCCCCATTAAGCAATGCCCAGTGTGCCGGGTTTAYATTGAACGCAACGAAGGCTGTGCTCAGATGATGTGTAAGAACTGCAAGCACACGTTTTGCTGGTACTGCCTCCAGAACTTGGACAATGACATTTTCCTCAGACATTATGACAAAGGGCCGTGTCGGAATAAGCTCGGCCACTCGAGAGCCTCAGTGATGTGGAACCGAACACAGGTGGTCGGGATTCTTGTGGGGTTGGGCATCATTGCCTTGGTGACTTCACCCTTGCTGCTCCTGGCTTCCCCATGTATAATCTGTTGTGTCTGCAAGTCCTGTCGGGGCAAGAAGAAAAAGCATGACCCATCCACAACCTAA

Related Sequences

bmy_08417T0 Protein

Length: 294 aa      View alignments
>bmy_08417T0
MTAAENPTXGDLALAPLVTCKLCLCEQSLDKMTTLQECRCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQEAEIACLVSVDQFQLYQRLKSEREVHLDPYRMWCPVADCQTVCPVASSEPGQPVLVECPSCHLKFCSCCKDAWHAEVSCRDSQPSILPTEHGTLFVMEAEAPIKQCPVCRVYIERNEGCAQMMCKNCKHTFCWYCLQNLDNDIFLRHYDKGPCRNKLGHSRASVMWNRTQVVGILVGLGIIALVTSPLLLLASPCIICCVCKSCRGKKKKHDPSTT*