Sequence detailsbmy_08432 (Coding sequence)

Part of scaffold_378 (SequenceType object (1))

For more information consult the page for scaffold_378 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ITGB1BP2ENSTTRG00000009652 (Bottlenosed dolphin)

Gene Details

integrin beta 1 binding protein (melusin) 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009143, Bottlenosed dolphin)

Protein Percentage 89.01%
cDNA percentage 89.74%
Ka/Ks Ratio 1.07903 (Ka = 0.0099, Ks = 0.0092)

ITGB1BP2ENSBTAG00000012163 (Cow)

Gene Details

integrin beta-1-binding protein 2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016136, Cow)

Protein Percentage 94.54%
cDNA percentage 95.31%
Ka/Ks Ratio 0.37031 (Ka = 0.0326, Ks = 0.088)

ITGB1BP2 (Minke Whale)

Gene Details

integrin beta 1 binding protein (melusin) 2

External Links

Gene match (Identifier: BACU010346, Minke Whale)

Protein Percentage 87.0%
cDNA percentage 89.54%
Ka/Ks Ratio 0.65044 (Ka = 0.1021, Ks = 0.157)

Additional orthologs identified in other species via the OPTIC pipeline.

ITGB1BP2 (Human)   Itgb1bp2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1137 bp    Location:304626..300538   Strand:-
Raw sequence 
>bmy_08432
ATGTCTCTACTCTGCCATAACAAAGGCTGTGGGCAGCACTTTGACCCCCAAACCAACCTTCCTGACTGTAAGCATATAAACCTGGACAAAAAGGTAGGAAGTGATGTTTGGTATAGTATCTTTCCTTCCTTGATCCTTCTACCGGTATCCACAGATTCCTGTTGCCATCACCCTGGGGTCCCAATCTTCCATGATGCACTTAAGGGTTGGTCCTGCTGCCGGAAGCGAACTGTAGATTTCTCTGAGTTCTTAAACATCAAGGGCTGTACTGTGGGACCACACTGTGCTGAGAAGCTCCCTGAGACCCCTCAACCTGAGGGCCCTGCCACAAGCAGTTCACTTCAGGAGCAAAAACCTCCGAATACGATTCCAAAGTCAGCAGAGACTTTGCGCCGGGAGAGGCCCAAGTCAGAGTTGCCTCCAAAGCTGCTTCCGCTAAATATATCCCAAGCCCTGGGAATGGCACTGGAAAAGAAGGAATTAGACCAAGAACCTGGAGCAGGACTTGACAGTAGTCTGATCCAGACTGGTGCCAGCTGCCAGAACCCAGGATGTGATGCTGTTTACCAAGGCCCGGAGAGTGATGCTACTCCATGTACCTACCACCCAGGAGCACCTCGATTCCATGAGGGGATGAAATCTTGGAGTTGTTGTGGTATCCAGACCCTGGATTTTGGGGCATTCCTGGCACAGCCAGGGTGCAGAGTTGGTAGACATGACTGGGGGAAGCAGCTGCCAGCGTCTTGCCGTCATGATTGGCACCAGACAGATTCCTTAGTAGTGGTGACTGTATACGGTCAGATTCCACTTCCTGCGTTCAACTGGGTGAAGGCCAGTCAAACTGAGCTTCATGTCCACATTGTCTTTGATGGTAACCGTGTGTTCCAAGCACAGATGAAGCTCTGGGGGGTCATAAACGTGGAGCAGAGCTCTGTCTCCTTGATGCCATCTCGGGTTGAAATCTCCCTGGTCAAGGCTGACCCAGGATCCTGGGCCCAGCTGGAGCACCCCGATGCACTGGCTGAGAAGGCTAAGGCAGGGGTTGGGTTAGAGATGGATGAGGAAGAATCTGAGGATTCAGATGATGACCTGAGCTGGACAGAGGAGGAGGAAGAGGAGGAAGTGATGGGGGAATAG

Related Sequences

bmy_08432T0 SequenceType object (3)

Length: 379 aa      View alignments
>bmy_08432T0
MSLLCHNKGCGQHFDPQTNLPDCKHINLDKKVGSDVWYSIFPSLILLPVSTDSCCHHPGVPIFHDALKGWSCCRKRTVDFSEFLNIKGCTVGPHCAEKLPETPQPEGPATSSSLQEQKPPNTIPKSAETLRRERPKSELPPKLLPLNISQALGMALEKKELDQEPGAGLDSSLIQTGASCQNPGCDAVYQGPESDATPCTYHPGAPRFHEGMKSWSCCGIQTLDFGAFLAQPGCRVGRHDWGKQLPASCRHDWHQTDSLVVVTVYGQIPLPAFNWVKASQTELHVHIVFDGNRVFQAQMKLWGVINVEQSSVSLMPSRVEISLVKADPGSWAQLEHPDALAEKAKAGVGLEMDEEESEDSDDDLSWTEEEEEEEVMGE*