Sequence detailsbmy_08438 (Coding sequence)

Part of scaffold_378 (SequenceType object (1))

For more information consult the page for scaffold_378 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MED12ENSBTAG00000021351 (Cow)

Gene Details

mediator of RNA polymerase II transcription subunit 12

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000055184, Cow)

Protein Percentage 98.27%
cDNA percentage 95.81%
Ka/Ks Ratio 0.05756 (Ka = 0.0086, Ks = 0.1491)

Additional orthologs identified in other species via the OPTIC pipeline.

MED12 (Human)   Med12 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3126 bp    Location:438986..417133   Strand:-
Raw sequence 
>bmy_08438
ATGCGCTGGGCACCCGAGTTCATGATCGACACTCTGGAGAACCCTGCCGCTCACACCTTCACCTACACAGGGCTAGGCAAGAGTCTTAGTGAGAACCCTGCTAACCGCTACAGCTTTGTCTGCAATGCCCTTATGCACGTCTGTGTGGGGCACCATGATCCCGATAGGGTGAATGACATCGCAATCCTGTGTGCAGAGCTGACCGGCTATTGCAAGTCACTGAGTGCAGAGTGGCTGGGAGTGCTTAAGGCCTTGTGCTGCTCCTCTAACAATGGCACTTGTGGTTTCAACGACCTCCTCTGCAATGTAGATGTCAGTGACCTGTCTTTTCACGACTCCCTGGCCACTTTTGTTGCCATCCTTATCGCTCGGCAGTGTTTGCTCCTGGAGGATCTGATTCGCTGTGCAGCCATCCCTTCGCTCCTTAATGCTGCTTGCAGTGAGCAGGACTCTGAGCCGGGGGCCCGGCTTACCTGCCGCATCCTCCTCCACCTTTTCAAGACACCTCAACTCAATCCTTGCCAGTCGGACGGAAACAAGCCTACGGTAGGAATCCGCTCCTCCTGTGACCGCCACCTGCTGGCTGCCTCCCAGAACCGCATTGTGGATGGAGCTGTGTTTGCTGTTCTCAAGGCTGTGTTTGTACTTGGGGATGCGGAACTGAAGGGTTCAGGCTTCACTGTGACAGGAGGAACAGAAGAACTTCCAGAGGAGGAGGGAGGAGGTGGCAGTGGCGGTCGGAGGCAGGGTGGCCGCAACATCTCTGTGGAGACAGCCAGTCTGGATGTCTATGCCAAGTACGTGCTACGCAGCATCTGCCAGCAGGAATGGGTAGGAGAACGTTGCCTTAAATCGCTGTGTGAGGACAGCAATGACTTGCAAGACCCAGTGTTGAGTAGCGCCCAGGCCCAGCGCCTCATGCAGCTCATCTGCTACCCACATCGGCTGCTGGACAACGAGGATGGGGAAAACCCCCAGCGGCAACGCATTAAGCGTATTCTCCAGAACTTGGACCAGTGGACCATGCGCCAGTCTTCCTTGGAGCTGCAGCTCATGATCAAGCAGACCCCTAACAATGAGATGAACTCCCTCTTAGAGAACATCGCCAAGGCCACAATCGAGGTTTTCCAACAGTCTGCAGAGACAGGGTCATCTTCTGGAAACACTGCAAGCAACATGCCCAGCAGCAGCAAGACCAAGCCCGTGCTCAGCTCCCTAGAGCGCTCTGGTGTATGGCTGGTGGCTCCTCTCATTGCCAAACTGCCCACCTCAGTCCAGGGGCATGTGTTAAAGGCTGCTGGGGAAGAATTGGAGAAGGGCCAGCACCTGGGTTCCTCTTCGCGCAAAGAACGTGATCGACAAAAGCAGAAGAGCATGTCCCTGTTGAGCCAGCAGCCCTTCTTATCCCTGGTGCTGACGTGTCTGAAGGGTCAGGACGAGCAGCGCGAGGGACTCCTTACCTCCCTCTACAGCCAGGTCCACCAGATTGTGAATAATTGGAGAGATGACCAGTACTTAGACGATTGCAAGCCAAAGCAGCTAATGCATGAGGCGCTCAAACTGCGGCTCAACCTGGTGGGGGGCATGTTTGACACGGTGCAGCGCAGCACCCAGCAGACCACAGAGTGGGCTGTGCTCCTCCTGGAGATCATCATCAGCGGCACTGTCGACATGCAGTCCAACAATGAGCTCTTCACCACCGTCTTGGACATGCTGAGCGTGCTCATCAATGGCACCCTAGCTGCGGACATGTCCAGCATCTCCCAGGGCAGCATGGAGGAAAACAAGCGTGCCTACATGAACCTGGTGAAGAAGCTGCGGAAGGAGTTGGGGGAGCGCCAGTCAGACAGTCTGGAAAAAGTTCGCCAGCTGCTGCCACTGCCCAAGCAGACCCGAGATGTCATCACATGTGAGCCGCAGGGCTCCCTTATCGACACCAAAGGCAACAAGATTGCCGGCTTCGACTCCATCTTCAAGAAGGAGGGTCTACAGGTTTCCACCAAACAAAAGATCTCCCCCTGGGATCTTTTTGAAGGCTTGAAGCCATCAGCGCCACTGTCTTGGGGCTGGTTTGGAACAGTCCGGGTGGACCGGCGCGTGGCCCGCGGAGAGGAGCAGCAGCGGCTGCTGCTGTACCACACGCACCTGAGGCCCCGGCCCCGCGCCTATTACCTGGAGCCGCTGCCACTGCCGCCGGAAGATGAGGAGCCCCCAGCCCCCGCCCTGCTGGAGCCTGAGAAAAAGGCTCCAGAGCCCCCCAAAACTGACAAACCTGGGGCCGCTCCCCCCAGCACCGAGGAACGCAAGAAGAAGTCCACCAAGGGCAAGAAACGCAGCCAGCCTGCCGCCAAGACAGAGGACTATGGAATGGGCCCAGGCCGGAGTGGCCCCTATGGAGTGACAGTGCCTCCGGACCTCCTGCACCACACCAACCCTGGCTCCATATCCCACCTTAGCTACAGGCAGGGCTCCATAGGCCTCTACACCCAGAACCAGCCACTGCCGGCAGGTGGCCCCCGTGTGGACCCGTACCGCCCCGTGCGGTTACCGATGCAGAAGCTGCCGACCCGACCACCTTACCCTGGAGTGCTGCCCACCACCATGACTGGCGTCATGGGACTGGAACCCTCCTCCTACAAGACGCCTGTGTACCGACAGCAGCAGCCTGCGGTGCCCCAAGGACAGCGCCTTCGCCAACAGCTCCAGCAGAGTCAGGGGATGTTGGGACAGTCATCTGTCCATCAGATGACTCCCAGCTCTTCCTACGGTTTGCAGACCTCCCAGGGCTATACTCCTTACGTTTCTCATGTGGGATTGCAGCAACACACAGGCCCCGCAGGTACCATGGTGCCCCCCAGCTACTCCAGCCAGCCTTATCAGAGCACCCACTCTTCTACCAATCCTACTCTTGTAGATCCTACCCGCCACCTGCAGCAGCGGCCCAGTGGCTATGTGCACCAGCAGGCCCCAACCTACGGACACGGGCTGACCTCCACTCAAAGGTTTTCCCACCAGACACTGCAGCAAACACCCATGATAGGCACAATGACCCCACTGGGCGCCCAGGGTGTCCAGGCCGGCGTCCGGTCGGCTTCCATCCTGCCTGAGCAGCAGCAGCAGCAGCAG

Related Sequences

bmy_08438T0 SequenceType object (3)

Length: 1042 aa      
>bmy_08438T0
MRWAPEFMIDTLENPAAHTFTYTGLGKSLSENPANRYSFVCNALMHVCVGHHDPDRVNDIAILCAELTGYCKSLSAEWLGVLKALCCSSNNGTCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLIRCAAIPSLLNAACSEQDSEPGARLTCRILLHLFKTPQLNPCQSDGNKPTVGIRSSCDRHLLAASQNRIVDGAVFAVLKAVFVLGDAELKGSGFTVTGGTEELPEEEGGGGSGGRRQGGRNISVETASLDVYAKYVLRSICQQEWVGERCLKSLCEDSNDLQDPVLSSAQAQRLMQLICYPHRLLDNEDGENPQRQRIKRILQNLDQWTMRQSSLELQLMIKQTPNNEMNSLLENIAKATIEVFQQSAETGSSSGNTASNMPSSSKTKPVLSSLERSGVWLVAPLIAKLPTSVQGHVLKAAGEELEKGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVHQIVNNWRDDQYLDDCKPKQLMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLEIIISGTVDMQSNNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGERQSDSLEKVRQLLPLPKQTRDVITCEPQGSLIDTKGNKIAGFDSIFKKEGLQVSTKQKISPWDLFEGLKPSAPLSWGWFGTVRVDRRVARGEEQQRLLLYHTHLRPRPRAYYLEPLPLPPEDEEPPAPALLEPEKKAPEPPKTDKPGAAPPSTEERKKKSTKGKKRSQPAAKTEDYGMGPGRSGPYGVTVPPDLLHHTNPGSISHLSYRQGSIGLYTQNQPLPAGGPRVDPYRPVRLPMQKLPTRPPYPGVLPTTMTGVMGLEPSSYKTPVYRQQQPAVPQGQRLRQQLQQSQGMLGQSSVHQMTPSSSYGLQTSQGYTPYVSHVGLQQHTGPAGTMVPPSYSSQPYQSTHSSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQTPMIGTMTPLGAQGVQAGVRSASILPEQQQQQQ