Part of scaffold_378 (Scaffold)

For more information consult the page for scaffold_378 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNX12 ENSTTRG00000005336 (Bottlenosed dolphin)

Gene Details

sorting nexin 12

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005009, Bottlenosed dolphin)

Protein Percentage 71.29%
cDNA percentage 76.57%
Ka/Ks Ratio 0.62722 (Ka = 0.2562, Ks = 0.4085)

SNX12 ENSBTAG00000007871 (Cow)

Gene Details

sorting nexin-12

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010355, Cow)

Protein Percentage 99.3%
cDNA percentage 96.71%
Ka/Ks Ratio 0.02268 (Ka = 0.0031, Ks = 0.1382)

SNX12  (Minke Whale)

Gene Details

sorting nexin 12

External Links

Gene match (Identifier: BACU010338, Minke Whale)

Protein Percentage 99.3%
cDNA percentage 99.3%
Ka/Ks Ratio 0.16882 (Ka = 0.0032, Ks = 0.0188)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 579 bp    Location:475248..481709   Strand:+
>bmy_08442
TGCGTGCGTGCGTGCGTGGGCGCGCGTGCGCGGCGCCGTAGTCTGTGGGTTGGCTGGTTATTTTGCAAGCGGGAGGGGCCGTGCGCGCTCCTGCCTTCGGCCTCTGTCCCCCATCCCCCCTTCCCCGGTCCCGGTCTCTCCTTCGGAAAGATGTCGGACACGGCAGTAGCTGACACTCGGCGCCTTAACTCGAAGCCGCAGGACCTGACTGACGCTTACGGGCCGCCAAGTAACTTCCTGGAGATCGACATCTTTAACCCACAGACGGTGGGCGTGGGCCGCGCGCGCTTCACCACCTATGAGGTTCGCATGCGGACAAACCTACCTATCTTCAAGCTGAAGGAGTCCTGTATTGTAGTACCACCACTGCCTGGGAAAGCCTTGAAGCGGCAGCTCCCTTTTCGAGGAGACGAAGGGATCTTTGAGGAGTCCTTTATTGAAGAAAGGAGGCAGGGCCTCGAACAGTTTATTAACAAAATTGCTGGGCATCCACTGGCTCAGAACGAACGCTGCCTACACATGTTCCTGCAGGAGGAGGCAATTGACAGGAACTACGTCCCTGGGAAGGTGCGCCAGTAG

Related Sequences

bmy_08442T0 Protein

Length: 193 aa      View alignments
>bmy_08442T0
CVRACVGARARRRSLWVGWLFCKREGPCALLPSASVPHPPFPGPGLSFGKMSDTAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPIFKLKESCIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEEAIDRNYVPGKVRQ*