Part of scaffold_387 (Scaffold)

For more information consult the page for scaffold_387 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HMGB1 ENSBTAG00000018103 (Cow)

Gene Details

High mobility group protein B1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024094, Cow)

Protein Percentage 99.43%
cDNA percentage 97.14%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0944)

HMGB1  (Minke Whale)

Gene Details

high mobility group box 1

External Links

Gene match (Identifier: BACU000112, Minke Whale)

Protein Percentage 90.29%
cDNA percentage 91.81%
Ka/Ks Ratio 0.35231 (Ka = 0.0666, Ks = 0.1891)

Genome Location

Sequence Coding sequence

Length: 525 bp    Location:871209..868925   Strand:-
>bmy_08461
ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTCTTTGTGCAAACTTGCCRGGAGGAGCACAAGAAGAAGCATCCAGATGCTTCCGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAGAAAGGAAAGTTTGAAGACATGGCAAAGGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACTTATATCCCTCCTAAAGGGGAAACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTTTTCTTGTTTTGTTCTGAGTATCGTCCAAAAATCAAAGGAGAACATCCTGGCCTATCCATTGGTGATGTTGCAAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTTATGAGAAGAAGGCTGCTAAGCTGAAGGAAAAGTACGAAAAGGATATTGCTGCATACCGAGCTAAAGGGAAGCCTGATGCAGCAAAAAAGGGAGTC

Related Sequences

bmy_08461T0 Protein

Length: 175 aa      View alignments
>bmy_08461T0
MGKGDPKKPRGKMSSYAFFVQTCXEEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGV