Sequence detailsbmy_08463 (Coding sequence)

Part of scaffold_387 (SequenceType object (1))

For more information consult the page for scaffold_387 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USPL1ENSTTRG00000012056 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase like 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011428, Bottlenosed dolphin)

Protein Percentage 93.5%
cDNA percentage 96.45%
Ka/Ks Ratio 0.47871 (Ka = 0.0292, Ks = 0.061)

USPL1ENSBTAG00000001178 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001562, Cow)

Protein Percentage 80.91%
cDNA percentage 88.1%
Ka/Ks Ratio 0.47988 (Ka = 0.107, Ks = 0.2229)

USPL1 (Minke Whale)

Gene Details

ubiquitin specific peptidase like 1

External Links

Gene match (Identifier: BACU000111, Minke Whale)

Protein Percentage 97.91%
cDNA percentage 98.76%
Ka/Ks Ratio 0.40526 (Ka = 0.0091, Ks = 0.0224)

Additional orthologs identified in other species via the OPTIC pipeline.

USPL1 (Human)   Uspl1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3303 bp    Location:975219..1014120   Strand:+
Raw sequence 
>bmy_08463
ATGATGGATTCCCCGAAGATTGGAAATGGTTTGCCAGTGATTGGACCAGGGACTGATATAGGGATATCTTCACTCCACATGGTGGGGTATTTGGGAAAAAATTATGATTCAGCTAAAGTACCGTCAGATGGGTATTGCCCTGCTTGTAGGACGAAGGGAAAGTTAAAAGCCTTAAAGACTTACCGAATTAGTTTCCAAGAATCTGTCTTTTTGTGTGAGGATCTGCAGTGCATCTATCCCTTGGGCTCTAAATCACTTAATAACTTAATTACTCCTGATTTGGAAGATCGTCACACTCCAAATAAGCCTCAAAAAAGAAAGATCGTGGAAACCAACTATAAAGATTCACCTCTTGTAGCAAATTCCAAAAAGACTAAAAATCATAGTGGTATTGATGGTGAACAAGTTTTGAACAGTAAACATAATGAAGAAGAGTATGATGAAACCTCATCAGACTTACGTGGTTTACTACACGGTGGTCAACAGAATCCAATTAGGACAACTGATTCCTTGGAGCAGAATGAGATTTTGGAAGCTGATATTGTTGACACGGCTGCTGAAGAAGATTCTACTATGGTTGATGTTTCTGGAACTGGAGGGACTTCCCCTCAAAATGAAGGATGCACATCTGAACTGGAAATGCCGTTGGAGAGCAAGCATACCTCATTTTGCCAGATTTCATGTGTCCAATGGAAAAACGCACATGCTCTCTGTTGGTTAGACTGTATCCTGTCAGCGTTGGTGCACTTGGAAGGGCTGAAAAACACTGTGACTGACCTGTGCTCTACAGAGGAGTCTGTGTTCGGTCGGTTGTTCACTAGGTATAATCAAGCCAATGAGTTTCTGCACACCAGTCAGTTGGATGGAGTTAAAGATGGAGATTGTAAAAAACTTCCTTCTGAAATATTTGCAAAGATAGAGACCTGTCTGAATGAAGTCAGAGATGATATTTTTATTAGGCTTCAGCCTCAGCTTAGGTGTACATTAGGTGATATGGAAAGCCCTGTGTTTGCATTTCCCCTGCTCTTAAAAACAGAACCCCACGTTGAGAACCTCTTCACATATTCTTTTTCTTGGAATTTTGAATGTTCACACTGTGGACACAAATATCAAAACAGGTGTATGAAGAATCTGGTCACCTTTACAAACGTCATCCCTGAGTGGCACCCGGTTAATGCTGCCCATTTTGGTCCATGTAACAATTGCAACAATAAGTCACAGATAAGAAAAATGGTATTAGAAAAAGTATCTCTCATATTCATGTTGCACTTTGTGGAAGGCTTACCGCATAATGACTTGCAGCACTATTCATTTCATTCTGAAGGCTGTCTTTATCAAATAACTTCTGTAATTCAGTACCAAGCAAATAATCATTTTATAACATGGATTTTAGATGCTGATGGAAGTTGGCTGGAATGTGATGACTTAAAAGGCCCATGTTCTGAAAGGCATGAGAAATTTCAAGTTCCTGCTTCAGAGATACATATTGTTATCTGGGAAAGAAAAACATCCCAAATGACAGATAAAGCACCTGCCTGCTGCCCACTTAAAAAGACTTATGATCAACACGCTTTCGGAGATGAGAATCAAGTATCTCCAGCATTGTGTTCTGTAGGTGATGCTGCCTCAGCTGAAATGTCCTCAGGAACTCACCCCACAAATGTGTCAGTTGCTCCTAATACTCTTTCACAGGATGAAGCCGTAACTTTTGAACATCATTTATTTCCAGGTCTGAAAGGTTTGGTCGACAAGAATATTTCACCTTTGACATTTGAAGAAATACAGGTTAACTCTGAAGGTTTTTTATTAGAAAATAAACCTGTGGCAGAAAATGCAGGGGTTGTCAAAACACATACTTTGCAATCGCAAGAGTCACTAATGGCTTCTTTAGTATCGGCTCCATGCAAGGACAAGCTTACCCAAGACCAGTTTGTGGATTTAAGCTTTTCATCTCAACTTGTAAATACAAATGTGCCATCAGTACAGCTGAATACAAAAGATACTGTAGTTACTCAGCCTGTGAATGATATTCGTGCTACTGACCTTACACAGAGAGTAAAGTCAGTAGAAACTGAGGGTACAGTTGCCCTAGAGAAGGATGCTCCATCAAAACAATTTCTTTTACCAAAAACTGAGAAATTAAAACCAGAACGACATGTTACATCTCAGGTGTCTGATTTGAAGGAAAAAGAAACTGCAGCATCTTCTCAMACCATAACAGCTAAGCCGTCACAGAATCCATCTCTGAAAGAAAATCAGAAAAAACCATTTGTGGGAAGTTGGGTTAAAGGCTTATTAAGCAAGGGTGTTTCTTTTATGCCGTTTTGTGTTTCAGCTCATAATAGAAACACTATGACTGATTTGCAGCCTTCAGTTAAGGGGGCAAGTAATTTTGGTGGCTTTAAAACTAAAGGTACAAAACAAAAGGGTAACTGGGCATCCAGGGAAGCTCATAGGTGTGCAAGTAAGCCTCCTCCAGTTAGTAATCCTGCACCAAGCCATCCATCAACAGTTAGCACAGCTTCTCCTCTCCCTGCTAATGGTAATGGTGATTTGGAAGTTTTGAAGAAATGTGAAAACGCCTCATATGGAGCTCACCTCAACCACAGTTCTCATGGAAATGAAAATGGTGTTTCTTCAGCAAACCATGGAGACTCAGTTGAGGGTCAGATTCATAAACTTCGTCTAAAACTTCTTAAAAAACTTAAGGCAAAAAAGAAGAAATTAGCTGCTCTTATGTCTTCCCCCCAAAATGGAACACTTCCAAGTGAAAATTTAGAACATATGTCCCATTGTGGATCTCCAAATGATTGTGAATCAATAGAAGACTTGTTAAAAGAACTACAACATCAAATTGATATTGCCGATAGTAAATCTGGATGCGCCACAGTTCCTAGTGTTTCCTCATACAGTAGTCAAACTCATGAAGAAATTTTAGCAGAATTACTGTCCCCTACAACTGTTGTTTCAACAGAGATCTCAGAAAATGAGGAGGCTGACTTTAGGTACTTAGAAATGGGAGATAATCATATCCCAGCACCAGTACCTAGTGAATTAAACAATATTCCCCAAGACATACATCTGAGACAGGACCATAATTACTGCAGCCCCACCAAGAAAAATCAATGCAAAGTTCAGCCAAACTCACTCACAAATAATGCCTATGTTACAACATTGAACTCGGAAAATCCCATGAAGACTGATATTTTTGATGAGTTTTTTTCTACTTCAGCGTTAAATTCTTTAGCAAGTGACACATTAGACTTCACTCATTTTGATGACTATCTGTTTGAGAATTGTTGA

Related Sequences

bmy_08463T0 SequenceType object (3)

Length: 1101 aa      View alignments
>bmy_08463T0
MMDSPKIGNGLPVIGPGTDIGISSLHMVGYLGKNYDSAKVPSDGYCPACRTKGKLKALKTYRISFQESVFLCEDLQCIYPLGSKSLNNLITPDLEDRHTPNKPQKRKIVETNYKDSPLVANSKKTKNHSGIDGEQVLNSKHNEEEYDETSSDLRGLLHGGQQNPIRTTDSLEQNEILEADIVDTAAEEDSTMVDVSGTGGTSPQNEGCTSELEMPLESKHTSFCQISCVQWKNAHALCWLDCILSALVHLEGLKNTVTDLCSTEESVFGRLFTRYNQANEFLHTSQLDGVKDGDCKKLPSEIFAKIETCLNEVRDDIFIRLQPQLRCTLGDMESPVFAFPLLLKTEPHVENLFTYSFSWNFECSHCGHKYQNRCMKNLVTFTNVIPEWHPVNAAHFGPCNNCNNKSQIRKMVLEKVSLIFMLHFVEGLPHNDLQHYSFHSEGCLYQITSVIQYQANNHFITWILDADGSWLECDDLKGPCSERHEKFQVPASEIHIVIWERKTSQMTDKAPACCPLKKTYDQHAFGDENQVSPALCSVGDAASAEMSSGTHPTNVSVAPNTLSQDEAVTFEHHLFPGLKGLVDKNISPLTFEEIQVNSEGFLLENKPVAENAGVVKTHTLQSQESLMASLVSAPCKDKLTQDQFVDLSFSSQLVNTNVPSVQLNTKDTVVTQPVNDIRATDLTQRVKSVETEGTVALEKDAPSKQFLLPKTEKLKPERHVTSQVSDLKEKETAASSXTITAKPSQNPSLKENQKKPFVGSWVKGLLSKGVSFMPFCVSAHNRNTMTDLQPSVKGASNFGGFKTKGTKQKGNWASREAHRCASKPPPVSNPAPSHPSTVSTASPLPANGNGDLEVLKKCENASYGAHLNHSSHGNENGVSSANHGDSVEGQIHKLRLKLLKKLKAKKKKLAALMSSPQNGTLPSENLEHMSHCGSPNDCESIEDLLKELQHQIDIADSKSGCATVPSVSSYSSQTHEEILAELLSPTTVVSTEISENEEADFRYLEMGDNHIPAPVPSELNNIPQDIHLRQDHNYCSPTKKNQCKVQPNSLTNNAYVTTLNSENPMKTDIFDEFFSTSALNSLASDTLDFTHFDDYLFENC*