Sequence detailsbmy_08476 (Coding sequence)

Part of scaffold_373 (SequenceType object (1))

For more information consult the page for scaffold_373 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VOPP1ENSBTAG00000012073 (Cow)

Gene Details

Vesicular, overexpressed in cancer, prosurvival protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016016, Cow)

Protein Percentage 87.68%
cDNA percentage 90.58%
Ka/Ks Ratio 0.21644 (Ka = 0.0572, Ks = 0.2643)

VOPP1 (Minke Whale)

Gene Details

vesicular, overexpressed in cancer, prosurvival protein 1

External Links

Gene match (Identifier: BACU008708, Minke Whale)

Protein Percentage 95.77%
cDNA percentage 98.12%
Ka/Ks Ratio 0.9696 (Ka = 0.019, Ks = 0.0196)

Additional orthologs identified in other species via the OPTIC pipeline.

VOPP1 (Human)   Vopp1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 417 bp    Location:13..3024   Strand:+
Raw sequence 
>bmy_08476
ATGGGCTGCCTGGCCGGGAGTGTGGCTGCGCTGCTGCTTGAGCTGCCCGTGGACTGCACAGAGGCCCAAAAGCATTGCTGCTATTTTGAAGGACTCTATCCAACATATTATATATGCCGCCCTTGCGAGGACTGCTGTGGCTCCAGGTGCTGTGTGCAGGCCCTCTCCATACAGAGGCTGTGGTACTTTTGGTTCCTCCTCATGATGGGCGTGCTCTTCTGCTGTGGTGCCGGCTTCCTCATCCGGAGGTGCATGTACCCCCCGCCGCTGATCGAGGAGCCGGCATTCAACGTGTCTTACACCAGGCAGCCCCTGAACCCCACTCCAGGAGCCCAGCAGCTGGGGCTGCCGTTTTACACCGATCCTGGAGGACCAGGGATGAATCCTGCTGGGAACCCTGTGGCGATGGCTTTCTAG

Related Sequences

bmy_08476T0 SequenceType object (3)

Length: 139 aa      View alignments
>bmy_08476T0
MGCLAGSVAALLLELPVDCTEAQKHCCYFEGLYPTYYICRPCEDCCGSRCCVQALSIQRLWYFWFLLMMGVLFCCGAGFLIRRCMYPPPLIEEPAFNVSYTRQPLNPTPGAQQLGLPFYTDPGGPGMNPAGNPVAMAF*