Sequence details bmy_08485 (Coding sequence)

Part of scaffold_380 (Scaffold)

For more information consult the page for scaffold_380 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

STAMBPL1 ENSTTRG00000004068 (Bottlenosed dolphin)

Gene Details

STAM binding protein-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003828, Bottlenosed dolphin)

Protein Percentage 98.96%
cDNA percentage 98.0%
Ka/Ks Ratio 0.09383 (Ka = 0.0049, Ks = 0.0523)

STAMBPL1 ENSBTAG00000001298 (Cow)

Gene Details

AMSH-like protease

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001709, Cow)

Protein Percentage 94.54%
cDNA percentage 92.32%
Ka/Ks Ratio 0.11713 (Ka = 0.0288, Ks = 0.2455)

STAMBPL1  (Minke Whale)

Gene Details

STAM binding protein-like 1

External Links

Gene match (Identifier: BACU007892, Minke Whale)

Protein Percentage 95.09%
cDNA percentage 95.57%
Ka/Ks Ratio 0.33412 (Ka = 0.0318, Ks = 0.0951)

Additional orthologs identified in other species via the OPTIC pipeline.

STAMBPL1 (Human)   Stambpl1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1266 bp    Location:341538..313804   Strand:-
Raw sequence 
>bmy_08485
ATGGATCCGCCGTTAACGGTGAATTCCCTGAAAAAGTTAGCTGCGATGCCGGACCACAGGGATGTTTCCCTCAGCCCGGAAGAGCGAGTCCGCGCCCTMAGCAAGCTGGGCTGTAATATCACCATCAATGAAGATATCACTCCGCGCCGCTACTTTAGATCCGGRGTAGAAATGGAGAGGATGGCGTCCGTGTATTTGGAAGAAGGAAACTTGGAAAATGCCTTTGTTCTGTATAATAAATTTATAACTTTGTTTGTAGAAAAGCTTCCTAACCATCGAGATTACCAGCAATGTGCAGTACCCGAAAAGCAGGATATTATGAAGAAACTGAAGGAGATTGCATTCCCAAGGACAGATGAATTGAAAAAGGACCTTTTAAAGAAATATAACGTAGAATACCAAGAATATTTGCAAAGCGAAAACAAATATAAAGCTGAAATTCTCAAAAAACTGGAGCATCAGAGATTGATAGAGGCAGAAAGGAAGCGGATCGCTCAGATGCGCCAGCAGCAGCTAGAATCGGAGCAGTTCTTGTTTTTCGAAGATCAGCTCAAGAAGCAAGAATTAGCCCGGAGTCAGATGCGAAGCCAGGAACCTCCAGCACAGTCAGAGCAGATTGATGGGAGTGCTTTGTCCTGCTTTTCCACACACCAGAACAATTCCCTGCTGAATGTATTTGCAGATCAGCCTAATAAAAGTGATGCAACCAATTACGCTGGCCACTCACCTCCCGTAAACAGGGCCTTAAAGCCAGCTGCAACTCTAAGTGCTGTTCAGAATTTAGTGGTTGAAGGACTGAGATATGTTGTTTTATCAAGAGATCTTTGCCACAGATTTCTGCTCCTGGCAGAATCTAATACAGTGAGAGGAATCGAAACCTGTGGAATACTCTGTGGGAAACTGACGCATAATGAATTTACTATTACCCACTTAATCGTGCCAAAACAGTCTGCGGGACCAGACTACTGCGAYGTGGAGAATGTAGAAGAATTATTCAGTGTTCAGGATCAACACAATCTCCTCACTCTGGGATGGATCCATACACATCCAACCCAAACTGCGTTCTTATCCAGTGTTGATCTCCACACTCACTGTTCTTATCAGCTCATGTTGCCAGAGGCCATTGCCATTGTCTGTTCACCGAAGCATAAAGACACCGGCATCTTCAGGCTCACCAATGCTGGCATGCTTGAGGTTTCCGCTTGTAAAAAGAAGGGCTTTCATCCACACACCAAGGACCCCAGGCTGTTCAGTAATGAGGGCTAG

Related Sequences

bmy_08485T0 Protein

Length: 422 aa      View alignments
>bmy_08485T0
MDPPLTVNSLKKLAAMPDHRDVSLSPEERVRALSKLGCNITINEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDELKKDLLKKYNVEYQEYLQSENKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFFEDQLKKQELARSQMRSQEPPAQSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAGHSPPVNRALKPAATLSAVQNLVVEGLRYVVLSRDLCHRFLLLAESNTVRGIETCGILCGKLTHNEFTITHLIVPKQSAGPDYCDVENVEELFSVQDQHNLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKDPRLFSNEG*