Part of scaffold_381 (Scaffold)

For more information consult the page for scaffold_381 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TIRAP ENSBTAG00000021504 (Cow)

Gene Details

toll/interleukin-1 receptor domain-containing adapter protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028660, Cow)

Protein Percentage 84.23%
cDNA percentage 89.49%
Ka/Ks Ratio 0.24205 (Ka = 0.0767, Ks = 0.3169)

TIRAP  (Minke Whale)

Gene Details

toll-interleukin 1 receptor (TIR) domain containing adaptor protein

External Links

Gene match (Identifier: BACU010185, Minke Whale)

Protein Percentage 93.24%
cDNA percentage 94.74%
Ka/Ks Ratio 0.17089 (Ka = 0.0305, Ks = 0.1787)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 774 bp    Location:10760..7193   Strand:-
>bmy_08495
ATGGCATCGTCACCCTCCTTGCCAGCTCCTCGTTCCAGGTCCAAGAAGCCTCTGGGCAAGATGGCTGACTGGTTCAGGCAGGCCCTGTCGAGAAAGCCCACAAAGACGCCCGTCTCCCCAGAAAGCACCCGCAGTGACGTTTCACAGCCGAGCTCCTCGGACAGGCCCCCACCCCTGGGCCCCAGCGCAGCGGTGTCTTCCACCCCGCCGCCGACACACTTGGGCACCCACGGCGGCGGCGGCCGCTGGAGCAAAGACTATGATGTGTGCGTGTGCCACAGCGAGGAGGACCTGGTGGCCGCCCAGGAGCTGGTCTCCTACCTGGAGGGCAGCGCTGCCGGCCTGCGCTGCTTCTTGCAGCTTCGCGACGCAACCCCCGGCGGCGCCATAGTGTCCGAGCTGTGCCAGGCGCTGAGCAGCAGCCACTGTCGCGTGCTGCTCATCACGCAGGGCTTCCTCCGGGACCCGTGGTGCAGGTACCAGATGCTGCAGGCGCTGAGCGAGGCCCCCGGGGCGGAGGGCCGCACCATCCCCCTGATGTCAGGCCTCCCCAGAGCCGCCTACCCCGCCGAGCTCCGATTCATGTACTTCGTGGACGGCTGGGGTCCCGACGGCGGCTTTCGCCAAGTCAAGGAGGCTGTCACTCGACCTGCAGACCCTCAGCTGACACTTCTTACATCAACACGGATGCAGACAGTTGGAACAAAGCTGCAAATGGAGTTAGAGGGCCTAGGACCTTGGATTCCAGCAGACGTGCCAAGTTGTAAGGAGTAA

Related Sequences

bmy_08495T0 Protein

Length: 258 aa      View alignments
>bmy_08495T0
MASSPSLPAPRSRSKKPLGKMADWFRQALSRKPTKTPVSPESTRSDVSQPSSSDRPPPLGPSAAVSSTPPPTHLGTHGGGGRWSKDYDVCVCHSEEDLVAAQELVSYLEGSAAGLRCFLQLRDATPGGAIVSELCQALSSSHCRVLLITQGFLRDPWCRYQMLQALSEAPGAEGRTIPLMSGLPRAAYPAELRFMYFVDGWGPDGGFRQVKEAVTRPADPQLTLLTSTRMQTVGTKLQMELEGLGPWIPADVPSCKE*