Part of scaffold_377 (Scaffold)

For more information consult the page for scaffold_377 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000015038 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014255, Bottlenosed dolphin)

Protein Percentage 83.09%
cDNA percentage 86.12%
Ka/Ks Ratio 0.72323 (Ka = 0.0721, Ks = 0.0997)

BT.91470 ENSBTAG00000000854 (Cow)

Gene Details

protein transport protein Sec16B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001137, Cow)

Protein Percentage 82.3%
cDNA percentage 87.19%
Ka/Ks Ratio 0.43366 (Ka = 0.1074, Ks = 0.2476)

SEC16B  (Minke Whale)

Gene Details

SEC16 homolog B (S. cerevisiae)

External Links

Gene match (Identifier: BACU004559, Minke Whale)

Protein Percentage 89.93%
cDNA percentage 91.56%
Ka/Ks Ratio 0.59423 (Ka = 0.0701, Ks = 0.118)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3693 bp    Location:88493..51945   Strand:-
>bmy_08531
GAAGATAAAGTAACTACACAACTGACTCAAAACGCGAGAGAAATTCAGAAGTGGCCGCCTCAGCCAGCGGGAAGGCCCCCAGCACCATCAAGGGATCCAGACCGAGGGCTTCAGAGAGATAGATACTATCGGCCTATTCGTCACTCTTGGCACAATGGAGAGAGGGTCCATCAAAGACAAGACATGGGCAGGAGCCCCCAACCACAGCAGGACCCTGGGGCAGACCACCARCAGCCTCATTATGCGTCCAGGCCTGGGGAATGGCATCAGCCTGTGTCCAGGGTTGACTATTATAAAGGTGGTTATCCCAGTCAGTTGTATTCAAGGCCAGGCCTTGAGGATCTATATCAAAGCTATCACTCTCCAGCCCTAAGGGAAGAATATACTTATGGAAGTTATTACTACCATGGACACCCGCAGCAGCTGCGGGGAGAAAGAGTGCCAAGGCAAGGGAGTCCTTATAACTGGCATGAAGATTATCGAGATCAAAAGTACCTGAATGAACACCAACATGAAAACCAGAATAGTCCGTTTGGAACAAATAGTGAGACCCAGTTCCAATCTAAGCGYTGGAACMCTTATAAAGACAGTCCTGCTTCTAACTCTGGACAGGAGAGGCCTGGGGACTTATTTCTGGAGAGTCCGCTAACTGGGGCCCAGAAAAACAAGCCATCACTGACCGAGGAGTCCAACCTTCTCCAGCAGCACGAGTCTGGTCTCACCTCCAGCAGCTATGAGCTCAGTCAGTACATGGCAGATGCCTCTGAGCTGTACGACCCCATGGCTGCAGTGGCTTGGCGTCCAATTCAGGCTGAGGACATCTCGGCAGCTGGTCCCAAGACACCCATGAAGTTCTACATCCCTCACGTGCCTGTGAGTTTTGGGCCAGGAGGTCAGCTGGTGTGTGTGGGTCCCAGATCTCCCAGTGATGGACAGACGGCCCTTGTTGAACTGCACAGCATGGAGGTTATTCTTAATGATTCTGAGGAACAAGAAAAGATGAGGACTTTCTCAGGACCCCTGATTAGGGAAGATGTACACAAGGTGGACATCGTGACGTTTTGCCAGCAGAAAGCAGCGCAGAGTCGCAAATCTGAGACACCGGGGAGCAGAGACTCGGCTCTACTGTGGCAACTGTTGGTTCTCCTTTGTCGGCAGAACGGGTCCGTGGTGGGGTCTGACATCGCGGAGCTGCTGATGCAGGACTGCAAGAAGCTGGAGAAGTACAAGCGGCAGCCGCCTGTGGCCAACCTCATCAACCTGACGGATGAGGACTGGCCAGTACTGAGCTTGGGGACCCGGAACCTGCTGACTGGGGAGATTCCCCCCAGCGTGGAGACGCCTGCGCAGATCGAGGCCTTGGAGTGGGCCATGAAGAACCATTTGTGGGGTCATGCTTTGTTCCTCGCCAGCAAGATGGACCCGAGGACCTACAGCTGGGTCATGAGTGGCTTCACCAGCACGCTGGCGCTCAACGACCCACTGCAGACCCTCTTCCAGCTCATGTCGGGGAGGATCCCACAGGCAGCCACGCTCTTGGGGTTAGGGGCACCAGGAGGAAATCTGAAAATTAGTGACCAAGAGTGTCATTCCATTTATCTATCTCCCAACATCCCTGTGTGTAACGCAAAATCAATGAGTGGCCACATTGCCGGCATCATAATGGGCGTTCCCGGAAAACCAGGAAATAGACAACAACCTTCCTTACTTACCTATGTTCTGGTCAGGGCTACATTACTCAGTCAATTTTCAATTTTTTCTGCTGCTTTTCAGTGTTGTGGGGACGAGCAGTGGGGAGACTGGAGGCCGCACTTGGCTGTGATTCTGTCGAATCAAGGTGGGGACCCGGACCTGTATCAGCGCACGATTGTCACCATGGGGGACACCCTGGCTGGGAAGGGGCTGGTGGAAGCAGCTCACTTCTGCTACCTCATGGCTCACGTGCCCTTCGGCTCCTACACCGTAAAGACAGACCACCTGGCCTTGCTGGGCAGTAGCCACAGTCAAGAGTTTTTGAAATTTGCAACAACTGAGGCTATCCAGAGGACGGAAATCTTCGAGTACTGTCAGATGCTGGGCCGCCCCAAATCCTTCATCCCTTCTTTCCAGGTGTATAAGCTCCTTTATGCTTCCCGTCTGGCAGATTACGGCCTTGCGTCCCAGGCCTTGCATTACTGCGAAGCCATTGGCACAGCCCTCCTGAGCCAGGGGGAGAACAGTCACCCTGTGCTATTAGTGGAACTCATCAAGCTTGCAGAGAGGCTGAAGCTGTCAGATCCTCTGGTTTTAGAACGCCACCGCCGTCACCGAGGAGACAGGGACCTGGAGCCAGACTGGCTGGTACATCTTCGGGGGCACCACAAGGAGCTGCAGCAAAAGGCAGCAGGAGACATTGGGGATCCTCGCTCTGCTCACTCGGATATTTTGGGAGCCAGAAAAACAACAGACGACACTTTCTACCAGGATCTTTCTGGACATCAAGGCAACTCAGAAGCCCTTGGGGACTGCTCAGCCCTGTGGCCAACACTGGAGCCGATGGGCCCGGCCCATCCCAGCCCACAGCAGCCCCTTCCCCTCCAGCCCAGCTCCTACCCAGCAGGAGGAGGTTCCGGGCAGACGGGGGTCCCGGTGCCTCTTTACTCAGTTCCTGAGACCCATCTGCCAGGGACCGGTGGCAGCGTGGCAGTGACAGGGACTCCTGGAGGAAGGGCCTGGGAGGAAGCCCAGCAGATGCACCCGCCCCCTGGAGAGAACACAGTGTCTCCAGAAACCTTCCAGCATCCTGATGGGCAGAAGGTTGTTTCCAAACCGCAGATCCTGAGAGGTGGAGAGGAGGCTTGTTCCGGTTCATGTTCAGTCCTGCCAACCTATATCCATGGGGGCAGGGCCGGCAGGGCTGAGTGTAGCTTTGGACTCACACATCCGCTCCCTCTGATGCCCTCTTCTTACTGTTGCACCGAACACTTGCTGTGCTCTGCCCCACCATGGAAGACTCTTGATATTTCTTCCTTTCTTTTAATTTTTACCTTGCTTTATTTCCAAGAAGGACCTACCGCAGCTGAATCTCTTCTGCCCAGGAGGATGAGGAGGAGTCCTCCGATGAGGCAGATAAGAAGTCTTCCGAAAACACCGCCCAGAGAGAAAAGCTCGGAGACGCGAAGGAGAGTACAAAGGTGGAGGGACTCTTCTCTTCCCAGAGGGCGGAGCAGAGCTGGGAATCTGGGCTTCGGTGGTGTCCCTGCCCCTCCTGTCTCACCACCATCACAGAGCTCGGGGTTTGGCTGGCTCAGCTGGTTTCGCCCGAAGCCCGCCAGCGATGCGCCCCCCCCTGGAGACGAAGACGCATCTGACGGTCCTGACTCTGAGCAGGAAGCCCCCCGAGCATCTTCTCCTCCCCAGCCCAGCCCGGGCCTCTCGCCGACGCCGCCCCCAGCTCCCCAGCCTCTGCCGGACGCCGGCGCCTCCTCCAGGGACACAGGTGGGAGTGAAGCCCGAGGATCAGCGTCCGGGGCCGGGAGAGCCGAGGGCACGGGGAGTGGAGGCTTGTTGGGACCTGAGGATGTTTCCTCTGGGCTCTACTTCAGCCCTGGTGTTCTGCTTCCCCCACCCCCCTTGAAAGGGGCTCTCTCCATGGCTACCAGCTTGAACCGGCCAAATCGCCTAGCTCAGCGCCGCTATCCAACCCAGCCATGA

Related Sequences

bmy_08531T0 Protein

Length: 1231 aa      View alignments
>bmy_08531T0
EDKVTTQLTQNAREIQKWPPQPAGRPPAPSRDPDRGLQRDRYYRPIRHSWHNGERVHQRQDMGRSPQPQQDPGADHQQPHYASRPGEWHQPVSRVDYYKGGYPSQLYSRPGLEDLYQSYHSPALREEYTYGSYYYHGHPQQLRGERVPRQGSPYNWHEDYRDQKYLNEHQHENQNSPFGTNSETQFQSKRWNXYKDSPASNSGQERPGDLFLESPLTGAQKNKPSLTEESNLLQQHESGLTSSSYELSQYMADASELYDPMAAVAWRPIQAEDISAAGPKTPMKFYIPHVPVSFGPGGQLVCVGPRSPSDGQTALVELHSMEVILNDSEEQEKMRTFSGPLIREDVHKVDIVTFCQQKAAQSRKSETPGSRDSALLWQLLVLLCRQNGSVVGSDIAELLMQDCKKLEKYKRQPPVANLINLTDEDWPVLSLGTRNLLTGEIPPSVETPAQIEALEWAMKNHLWGHALFLASKMDPRTYSWVMSGFTSTLALNDPLQTLFQLMSGRIPQAATLLGLGAPGGNLKISDQECHSIYLSPNIPVCNAKSMSGHIAGIIMGVPGKPGNRQQPSLLTYVLVRATLLSQFSIFSAAFQCCGDEQWGDWRPHLAVILSNQGGDPDLYQRTIVTMGDTLAGKGLVEAAHFCYLMAHVPFGSYTVKTDHLALLGSSHSQEFLKFATTEAIQRTEIFEYCQMLGRPKSFIPSFQVYKLLYASRLADYGLASQALHYCEAIGTALLSQGENSHPVLLVELIKLAERLKLSDPLVLERHRRHRGDRDLEPDWLVHLRGHHKELQQKAAGDIGDPRSAHSDILGARKTTDDTFYQDLSGHQGNSEALGDCSALWPTLEPMGPAHPSPQQPLPLQPSSYPAGGGSGQTGVPVPLYSVPETHLPGTGGSVAVTGTPGGRAWEEAQQMHPPPGENTVSPETFQHPDGQKVVSKPQILRGGEEACSGSCSVLPTYIHGGRAGRAECSFGLTHPLPLMPSSYCCTEHLLCSAPPWKTLDISSFLLIFTLLYFQEGPTAAESLLPRRMRRSPPMRQIRSLPKTPPREKSSETRRRVQRWRDSSLPRGRSRAGNLGFGGVPAPPVSPPSQSSGFGWLSWFRPKPASDAPPPGDEDASDGPDSEQEAPRASSPPQPSPGLSPTPPPAPQPLPDAGASSRDTGGSEARGSASGAGRAEGTGSGGLLGPEDVSSGLYFSPGVLLPPPPLKGALSMATSLNRPNRLAQRRYPTQP*