Part of scaffold_392 (Scaffold)

For more information consult the page for scaffold_392 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TFCP2L1 ENSTTRG00000003387 (Bottlenosed dolphin)

Gene Details

transcription factor CP2-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003179, Bottlenosed dolphin)

Protein Percentage 86.98%
cDNA percentage 89.08%
Ka/Ks Ratio 0.37439 (Ka = 0.0963, Ks = 0.2572)

TFCP2L1 ENSBTAG00000007765 (Cow)

Gene Details

transcription factor CP2-like protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010210, Cow)

Protein Percentage 87.82%
cDNA percentage 85.83%
Ka/Ks Ratio 0.148 (Ka = 0.0892, Ks = 0.6025)

TFCP2L1  (Minke Whale)

Gene Details

transcription factor CP2-like 1

External Links

Gene match (Identifier: BACU020484, Minke Whale)

Protein Percentage 83.8%
cDNA percentage 86.54%
Ka/Ks Ratio 0.42953 (Ka = 0.1274, Ks = 0.2966)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1410 bp    Location:432614..457751   Strand:+
>bmy_08549
ATGCCAGAGCCGGCTGCATTCTTCCTGGGGAAGGTGGAGGACACTGGAAAAACCAGTTTAGGATATATTAAAGCTGTTAACCACTGGGCCTGGGTGGGCCCTGAGGGTGTTGAGAAGACCTCTAGCTGGGGGAGTCCCAAATTTGAAGACAGAAACGGAAAATGTACTATTATCCCCCCTCCAGGTCAGTCTTATGAAATCCGACTGCTGGAGAATCGGAAGCTGGGAGATTTTCAGGATCTGAACACAAAATATGTGAAGAGCATCATCCGCGTGGTGTTCCACGACCGGCGGCTGCAGTACACAGAACACCAGCAGCTGGAGGGCTGGCGGTGGAGCCGGCCCGGGGACCGCATCCTGGACATCGATATTCCACTGTCTGTTGGTATCTTGGACCCCAGGGCCAGCCCGACCCAGCTGAATGCAGTTGAGTTTTTGTGGGACCCTTCGAAGAGAGCGTCTGCTTTCATTCAGGTGCACTGCATCAGCACAGAGTTCACCCCGAGGAAGCACGGGGGCGAGAAGGGCGTGCCCTTTCGGGTGCAGATCGATACCTTCAAGCAGAATGAGAATGGGGAGTACACGGAACACTTGCACTCGGCCAGCTGCCAGATCAAGGTGTTCAAGCCAAAGGGAGCTGACCGGAAGCAGAAGACTGACCGAGAGAAGATGGAGAAAAGAACGGCCCAAGAGAAGGAGAAGTACCAGCCATCCTATGAAACCACCATCCTCTCAGAGTGCTCCCCGTGGCCCGACGTGGTGTACCAGGTGAACAGTGCCTCGTCCCCAAGCTACAACGGCTCTCCGAACAGCTTCGGCCTTGGCGAAGGCAACAGCTCCCCAACCCACCCGGTGGAGGCCCTGCCCGTGGGCAGTGACCACCTGCTTCCCTCGGCCTCCATGCAGGACGCCCAGCAGTGGCTCCACCGCAACAGATTCTCCCAGTTTTGCCGGCTCTTCGCCAGCTTCTCGGGTGCTGACCTGCTGAAGATGTCCCGCGATGACCTGGTCCAGATCTGTGGCCCTGCAGATGGGATCCGGCTCTTTAACGCCATCAAAGGCAGGAACGTGAGGCCGAAGATGACCATTTACGTCTGCCAGGAGCTGGAGCAGAGCCGCGTGCCCCTGCAGCAGAAGCGGGACGGCGGCGGGGACCCCAATCTGTGTGTGTACCACGCCATCTTCCTGGAGGAGCTGACCACCTTGGAGCTGATCGAGAAGATCGCCAACCTGTACAGCATCTCCCCGCAGCACATCCATCGGGTGTACCGGCAGGGCCCCACCGGCATCCACGTGGTGGTCAGCAACGAGATGGTGCAGAATTTCCAAGATGAGTCCTGTTTCATCCTCAGTACCTTAAAAGCCGAGAGCAATGACGGCTACCATGTCATCCTGAAATGTGGCCTCTGA

Related Sequences

bmy_08549T0 Protein

Length: 470 aa      View alignments
>bmy_08549T0
MPEPAAFFLGKVEDTGKTSLGYIKAVNHWAWVGPEGVEKTSSWGSPKFEDRNGKCTIIPPPGQSYEIRLLENRKLGDFQDLNTKYVKSIIRVVFHDRRLQYTEHQQLEGWRWSRPGDRILDIDIPLSVGILDPRASPTQLNAVEFLWDPSKRASAFIQVHCISTEFTPRKHGGEKGVPFRVQIDTFKQNENGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAQEKEKYQPSYETTILSECSPWPDVVYQVNSASSPSYNGSPNSFGLGEGNSSPTHPVEALPVGSDHLLPSASMQDAQQWLHRNRFSQFCRLFASFSGADLLKMSRDDLVQICGPADGIRLFNAIKGRNVRPKMTIYVCQELEQSRVPLQQKRDGGGDPNLCVYHAIFLEELTTLELIEKIANLYSISPQHIHRVYRQGPTGIHVVVSNEMVQNFQDESCFILSTLKAESNDGYHVILKCGL*