Part of scaffold_374 (Scaffold)

For more information consult the page for scaffold_374 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

JAG1 ENSTTRG00000006190 (Bottlenosed dolphin)

Gene Details

jagged 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005880, Bottlenosed dolphin)

Protein Percentage 96.74%
cDNA percentage 96.32%
Ka/Ks Ratio 0.18893 (Ka = 0.022, Ks = 0.1166)

JAG1 ENSBTAG00000012817 (Cow)

Gene Details

protein jagged-1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009631, Cow)

Protein Percentage 94.23%
cDNA percentage 92.14%
Ka/Ks Ratio 0.09525 (Ka = 0.0336, Ks = 0.3528)

JAG1  (Minke Whale)

Gene Details

jagged 1

External Links

Gene match (Identifier: BACU000647, Minke Whale)

Protein Percentage 96.68%
cDNA percentage 97.0%
Ka/Ks Ratio 0.33006 (Ka = 0.0234, Ks = 0.0708)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3642 bp    Location:736529..770480   Strand:+
>bmy_08568
ATGCGGTCCCCACGGACGCGCGGCCGGCCCGGGCGCCCCCTGAGCCTCCTGCTCGCCCTGCTCTGCGCCCTGCGAGCCAAGGTGTGCGGGGCCTCCGGCCAGTTCGAGTTGGAGATCCTTTCCATGCAGAACGTGAACGGGGAGCTGCAAAACGGGAACTGCTGCGGCGGCGCCCGGAACCCGGGGGACCGCAAGTGCTCCCGCGACGAGTGTGACACGTACTTCAAAGTGTGCCTCAAGGAGTACCAGTCGCGCGTCACGGCCGGGGGGCCCTGCAGCTTCGGCTCGGGGTCCACGCCTGTCATCGGGGGCAACACCTTCAACCTCAAGGCCAGTCGCGGCAACGAACGCAACCGCATCGTGCTGCCTTTCAGTTTTGCCTGGCCGAGGTCCTACACTTTGCTTGTGGAGGCGTGGGATTCCAGCAATGACACTGTCCAACCCGACAGCATTATTGAAAAGGCTTCTCACTCAGGCATGATCAACCCCAGCCGGCAGTGGCAGACGCTGAAGCAGAACACGGGGGTTGCCCACTTTGAGTATCAGATCCGCGTGACCTGTGATGACTATTACTATGGCTTCGGCTGCAATAAGTTCTGCCGACCCAGAGACGACTTCTTTGGCCACTATGCCTGCGACCAGAATGGCAACAAAACTTGCATGGAAGGCTGGATGGGCCCTGAATGTAACAAAGCTATTTGCCGGCAGGGCTGCAGCCCCAAGCATGGGTCTTGCAAACTCCCAGGTGACTGCAGGTGCCAGTATGGCTGGCAGGGCCTGTACTGTGACAAGTGCATCCCACACCCAGGATGCGTCCACGGCACCTGTAACGAGCCCTGGCAGTGCCTCTGTGAGACCAACTGGGGTGGTCAGCTCTGCGACAAAGATCTCAACTACTGCGGGACCCACCAGCCGTGTCTCAATGGGGGAACTTGTAGCAACACGGGGCCTGACAAATATCAGTGTTCATGCCCCGAGGGGTACTCAGGACCCAACTGTGAAATTGCGGAACACGCCTGCCTCTCTGATCCCTGCCACAACAGAGGCAGCTGCAAGGAGACCTCCCTGGGGTTTGAGTGTGAGTGTTCTCCGGGCTGGACCGGCCCCACATGCTCTACAAACATTGATGACTGTTCTCCAAATAACTGTTCCCACGGGGGCACCTGCCAGGACTTGGTTAACGGATTTAAGTGCGTGTGCCCGCCCCAGTGGACGGGCAAAACGTGCCAGTTAGATGCAAATGAATGCGAGGCCAAACCTTGTGTAAATGCCAAATCCTGTAAGAATCTGATTGCCAGCTACTACTGTGATTGCCTCCCGGGCTGGATGGGTCAGAATTGTGACATAAATATTAATGACTGCCTCGGCCAATGTCAGAATGACGCCTCCTGTCGGGATTTGGTTAATGGTTATCGCTGTATCTGTCCACCTGGCTATGCAGGCGATCACTGTGAGACAGACATCGATGAGTGTGCCAGCAACCCCTGTCTCAACGGGGGTCACTGTCAGAACGAAATCAACAGATTCCAGTGTCTGTGTCCCACTGGTTTCTCTGGAAACCTCTGTCAGCTGGACATCGATTATTGCGAGCCCAATCCCTGCCAGAACGGTGCCCAGTGCTACAACCGTGCCAGCGACTATTTCTGCAAGTGTCCCGAGGACTATGAAGGCAAGAACTGCTCCCACCTTAAAGACCACTGCCGCACCACCCCCTGTGAAGTGATTGACAGCTGCACGGTGGCCATGGCCTCCAATGACACGCCTGAAGGGGTGCGCTATATTTCCTCCAATGTCTGCGGTCCCCACGGGAAGTGCAAGAGTCAGTCGGGAGGCAAATTCACCTGTGACTGTAACAAAGGCTTCACTGGAACGTACTGCCATGAAAATATTAACGACTGTGAGAGCAACCCCTGTAAAAATGGTGGCACTTGCATCGATGGTGTCAACTCCTACAAGTGTATCTGCAGTGGCGGCTGGGAGGGCGCCTACTGTGAGACCAATATTAACGACTGCAGCCAGAACCCCTGCCACAACGGGGGCTCGTGTCGTGACCTGGTCAACGACTTTTACTGCGACTGTAAAAACGGGTGGAAAGGCAAGACCTGCCACTCACGTGACAGCCAGTGTGACGAGGCTACGTGCAACAATGGTGGCACCTGCTATGACGAGGGGGACGCTTTCAAGTGCATGTGTCCCGGAGGCTGGGAAGGAACGACCTGTAACATAGACTGTTGCTGGATCCTCAGGGAGGGTGGTCCTGTCTGCTCTTATCTCGTAGCCCGAAACAGTAGCTGCCTGCCTAATCCCTGCCACAATGGGGGCACCTGTGTGGTCAACGGCGAGTCCTTCACGTGTGTCTGCAAAGAAGGCTGGGAGGGGCCCATCTGTACGCAGAGGCCTCTTCCTGTGTACATGTGTCCCACGGCGAATGGGACCAAGTGTGGTGTGGGCCTGGTTCCAATTGAGCAGAGTTACAACAGTGGCACGTGCGTGGATGGAGAGAACTGGTACCGCTGTGAGTGCGCCCCCGGCTTCGCTGGGCCCGACTGCAGGATAATTTCAGGGAGATCTTGCATCACCGTGGGGAGCGTGATACCTGATGGGGCCAAGTGGGACGATGACTGCAACACCTGCCAGTGCCTGGACGGGAGGATCGCCTGCTCGAAGGTGTGGTGTGGCCCCCGCCCTTGCTCGCTGCACAAAGGGCACAGCGAGTGCCCCAGCGGGCAGAGCTGCATCCCCATCCTGGACGCCCAGTGCTTCGTGCGCCCCTGCACTGGTGTGGGTGAGTGCCGGTCCTCCAGCCTCCAGCCCGTGAAGACCAAGTGTGCCTCCGACCCCTACTACCAGGACAACTGTGCCAACATCACGTTCACCTTCAACAAGGAGATGATGTCGCCGGGTCTCACCACAGAGCACATTTGCAGCGAATTGCGGAATTTGAATATTTTGAAGAATGTTTCTGCTGAATATTCAATCTACATAGCTTGCGAGCCTTCCCCTTCTGCAAACAATGAAATACACGTGGCCATTTCTGCTGAAGACATCCGGGATGATGGAAACCCAATCAAGGAAATCACCGACAAAATTATAGATCTTGTTAGTAAACGAGAAGGGAACAGCTCACTGATCGCCGCCGTTGCAGAAGTGAGAGTTCAGAGGCGTCCTCTGAAGAACAGAACAGATTTCCTGGTGCCCCTGCTGAGCTCGGTCCTGACCGTGGCCTGGGTCTGCTGCCTGGTGACCGCCTTCTACTGGTGCGTGCGCAAGCGGCGGAAGCCCGGCAGCCACGCGCGCTCGGCCTCTGAGGAGAGCACCACCAACAACGTGCGGGAGCAGCTGAACCAGATCAAGAACCCCATTGAGAAGCACGGGGCCAACACGGTCCCCATCAAGGACTACGAGAACAAGAACTCCAAAATGTCCAAAATAAGGACACACAACTCGGAGGTGGAGGAGGACGACATGGACAAGCACCAGCAGAAAGCCCGCTTCGCCAGGCAGGCCACGTACACGCTGGTCGACAGAGAGGAGAAGTCCCCCCACGGCACGCCGGCCAAGCACCCGAACTGGACAAACAAACAGGACAACAGAGACCTGGAGAGCGCGCAGAGCCTGAACCGCATGGAGTACATCGTATAG

Related Sequences

bmy_08568T0 Protein

Length: 1214 aa      View alignments
>bmy_08568T0
MRSPRTRGRPGRPLSLLLALLCALRAKVCGASGQFELEILSMQNVNGELQNGNCCGGARNPGDRKCSRDECDTYFKVCLKEYQSRVTAGGPCSFGSGSTPVIGGNTFNLKASRGNERNRIVLPFSFAWPRSYTLLVEAWDSSNDTVQPDSIIEKASHSGMINPSRQWQTLKQNTGVAHFEYQIRVTCDDYYYGFGCNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPECNKAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCDKCIPHPGCVHGTCNEPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEIAEHACLSDPCHNRGSCKETSLGFECECSPGWTGPTCSTNIDDCSPNNCSHGGTCQDLVNGFKCVCPPQWTGKTCQLDANECEAKPCVNAKSCKNLIASYYCDCLPGWMGQNCDININDCLGQCQNDASCRDLVNGYRCICPPGYAGDHCETDIDECASNPCLNGGHCQNEINRFQCLCPTGFSGNLCQLDIDYCEPNPCQNGAQCYNRASDYFCKCPEDYEGKNCSHLKDHCRTTPCEVIDSCTVAMASNDTPEGVRYISSNVCGPHGKCKSQSGGKFTCDCNKGFTGTYCHENINDCESNPCKNGGTCIDGVNSYKCICSGGWEGAYCETNINDCSQNPCHNGGSCRDLVNDFYCDCKNGWKGKTCHSRDSQCDEATCNNGGTCYDEGDAFKCMCPGGWEGTTCNIDCCWILREGGPVCSYLVARNSSCLPNPCHNGGTCVVNGESFTCVCKEGWEGPICTQRPLPVYMCPTANGTKCGVGLVPIEQSYNSGTCVDGENWYRCECAPGFAGPDCRIISGRSCITVGSVIPDGAKWDDDCNTCQCLDGRIACSKVWCGPRPCSLHKGHSECPSGQSCIPILDAQCFVRPCTGVGECRSSSLQPVKTKCASDPYYQDNCANITFTFNKEMMSPGLTTEHICSELRNLNILKNVSAEYSIYIACEPSPSANNEIHVAISAEDIRDDGNPIKEITDKIIDLVSKREGNSSLIAAVAEVRVQRRPLKNRTDFLVPLLSSVLTVAWVCCLVTAFYWCVRKRRKPGSHARSASEESTTNNVREQLNQIKNPIEKHGANTVPIKDYENKNSKMSKIRTHNSEVEEDDMDKHQQKARFARQATYTLVDREEKSPHGTPAKHPNWTNKQDNRDLESAQSLNRMEYIV*