Part of scaffold_384 (Scaffold)

For more information consult the page for scaffold_384 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TGFBRAP1 ENSTTRG00000013912 (Bottlenosed dolphin)

Gene Details

transforming growth factor, beta receptor associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013195, Bottlenosed dolphin)

Protein Percentage 95.24%
cDNA percentage 95.51%
Ka/Ks Ratio 0.19548 (Ka = 0.0265, Ks = 0.1354)

TGFBRAP1 ENSBTAG00000021731 (Cow)

Gene Details

transforming growth factor-beta receptor-associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028967, Cow)

Protein Percentage 90.76%
cDNA percentage 89.27%
Ka/Ks Ratio 0.10496 (Ka = 0.0506, Ks = 0.4825)

TGFBRAP1  (Minke Whale)

Gene Details

transforming growth factor, beta receptor associated protein 1

External Links

Gene match (Identifier: BACU004055, Minke Whale)

Protein Percentage 96.47%
cDNA percentage 96.24%
Ka/Ks Ratio 0.16605 (Ka = 0.0199, Ks = 0.1198)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2211 bp    Location:27345..58957   Strand:+
>bmy_08574
ATGATGAGCACCAAGGCCTTCACCCTGGTCCCCGCCGTCGAGCGGGAGCAGCTGATGGGCGACAGGGAGCGGGTGTCCCTGGAGTGCGTGGAGTGCTGCGGCCGGAACCTGTACGTGGGCACCAGCGACTGCTTCGTGTACCGCTTCCTGCTGGAGGAGAAGACCGTGCCCGGCGGGTCGGCCACGTTCACGGCCACCAAGCAGCTGCACAGACACCTGGGTTTCAAGAAACCGGTGAATGAGCTGCGGGCGGCGTCGGCCCTCCACCGGCTGCTGGTGCTCTGTGACGGCTCCATCACCCTGGTCCACATGCTGAGCCTGGAGCCCGTGCCCTCGGGTGCCCGCATCAAGGGGGCCACGGCCTTCGCCTTGAACGAGAACCCGGTGAGCGGAGACCCCTTCTGCGTGGAGGTCTGCATCATCTCCGTCAAGCGCAGAACCATCCAGGTGTTCCTGGTGTACGAGGACCGCGTGCAGATCGTCAGGGAGGTGTCCACTCCGGAGCAGCCCCTGGCAGTGGCGGTGGACGGCCACTTCCTGTGCCTGGCCCTGACCACCCAGTACATCATCCTCAACTATAGCACGGGCGTCGCCCAGGACCTGTTTCCCTTCTGCAGCGAGGAGAAGCGGCCCATCGTCAAGAGGATAGGGAGACAGGAGTTCCTCCTGGCAGGCCCCGGCGGATTGGGCATGTTTGCCACGGTGGCCGGGATATCTCAGCGCGCGCCCGTGCGCTGGTCGGAGAACGTGGTTGGAGCRGCCGTCTGCTTCCCATACGTCATTGCCCTCGACAACGAGTTCATCACCGTTCACAGCATGCTGGACCAGCAGCAAAAGCAGACCCTGCCCTTTAAGGAAGGTCACATCCTCCAGGATTTTGAAGGAAGAGTCATCGTTGCCACGAGTAAAGGAGTTTACGTCTTGGTTCCGTTACCTCTGGAAAAACAAATACAGGATCTTCTAGCAAGCCGGAGAGTGGAGGAGGCTCTGATTCTAGCGAAAGGCGCCCGGAGGAACATTCCAAAGGAAAAATTTCAGGTCATGTACCGGCGGATCCTGCAGCAGGCGGGCTTCATACAGTTTGCACAGCTTCAGTTCCTGGAGGCTAAAGAACTCTTCAGAAGCGGCCAGCTGGACGTGCGGGAGCTGATCTCGCTGTACCCCTTCCTGCTGCCCACGTCCTCCTCGTTCACCCGGTCCCACCCTCCTCTGCACGAGTTCGCAGACCTCAACCAGCTGACCCAGGGCGACCAGGAGAAGGTGGCCAAGTGCAAGCGCTTCCTCATGAGGTACCTGAACGAAGTCCGCAGCACGGAGGTGGCCGACGGCTGCAAGGAGGACATCGACACAGCCCTGCTCAAGCTGTACACGGAGGCGGACCACGACAGCCTGCTGGACCTCCTGGTCACCGAGAACTTCTGTCTGCTCACCGACAGCGCCGCCTGGCTGGAGAAGCACAAGAAGTACTTTGCACTGGGGCTGCTCTATCATTACAACCACCAAGACGCTGCTGCCGTTCAGCTGTGGGTGAGCATCGTCAACGGGGACATTCACGACTCTACGCGCTCAGACCTGTACGAGTACATCGTGGATTTCCTCACCTACAGCCTCGACCCGGACCTCGTGTGGCAGTACGCTGACTGGGTCTTGCAGAAAAATCCGGAGGTCGGAGTTCAAGTTTTCACCAAGAGACCTGTGGACGAACAGCAGAGTAGATTTAACCCAGATGATATCATCAGTTGCCTTAAGAAATACCCGCAAGCCCTGGTTAAGTACCTAGAACATCTGGTCACGGACAGGAGACTGCAGAAGGAGGAGTACCACACGCACTTAGCCGTCCTCTACCTGGATGAGGTGCTGCAGCAGAGGCCCAGCGCCAATGGCAAGGATGCAGAAGTGACCGAGACGCAGGCGAAGCTGCGACGCCTGCTCCAGAAATCTGATTTGTACCGAGTCCACTTTCTGCTGGGTGAGTGCATCTCGCTGGATAAACGTCACCGGCGGGGGCGTCCCTGCCTTTGTTTCTTTTTGCAGATGAAGCTGAAAGGAAGCTCAGTTCGGCTCTCAGACAAAAAGCTTTGCCAGATGTGCCAAAACCCCTTTTGCGAGCCCGTGTTTGTTAGGTATCCCAGCGGTGGTCTCGTCCACACCCACTGTGCGGCCAGCAGACACACGAACCCCAGCTCCCCCAGCCCCGGGGCTCGGACTTGA

Related Sequences

bmy_08574T0 Protein

Length: 737 aa      View alignments
>bmy_08574T0
MMSTKAFTLVPAVEREQLMGDRERVSLECVECCGRNLYVGTSDCFVYRFLLEEKTVPGGSATFTATKQLHRHLGFKKPVNELRAASALHRLLVLCDGSITLVHMLSLEPVPSGARIKGATAFALNENPVSGDPFCVEVCIISVKRRTIQVFLVYEDRVQIVREVSTPEQPLAVAVDGHFLCLALTTQYIILNYSTGVAQDLFPFCSEEKRPIVKRIGRQEFLLAGPGGLGMFATVAGISQRAPVRWSENVVGAAVCFPYVIALDNEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVATSKGVYVLVPLPLEKQIQDLLASRRVEEALILAKGARRNIPKEKFQVMYRRILQQAGFIQFAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEFADLNQLTQGDQEKVAKCKRFLMRYLNEVRSTEVADGCKEDIDTALLKLYTEADHDSLLDLLVTENFCLLTDSAAWLEKHKKYFALGLLYHYNHQDAAAVQLWVSIVNGDIHDSTRSDLYEYIVDFLTYSLDPDLVWQYADWVLQKNPEVGVQVFTKRPVDEQQSRFNPDDIISCLKKYPQALVKYLEHLVTDRRLQKEEYHTHLAVLYLDEVLQQRPSANGKDAEVTETQAKLRRLLQKSDLYRVHFLLGECISLDKRHRRGRPCLCFFLQMKLKGSSVRLSDKKLCQMCQNPFCEPVFVRYPSGGLVHTHCAASRHTNPSSPSPGART*