Sequence detailsbmy_08574 (Coding sequence)

Part of scaffold_384 (SequenceType object (1))

For more information consult the page for scaffold_384 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TGFBRAP1ENSTTRG00000013912 (Bottlenosed dolphin)

Gene Details

transforming growth factor, beta receptor associated protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013195, Bottlenosed dolphin)

Protein Percentage 95.24%
cDNA percentage 95.51%
Ka/Ks Ratio 0.19548 (Ka = 0.0265, Ks = 0.1354)

TGFBRAP1ENSBTAG00000021731 (Cow)

Gene Details

transforming growth factor-beta receptor-associated protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028967, Cow)

Protein Percentage 90.76%
cDNA percentage 89.27%
Ka/Ks Ratio 0.10496 (Ka = 0.0506, Ks = 0.4825)

TGFBRAP1 (Minke Whale)

Gene Details

transforming growth factor, beta receptor associated protein 1

External Links

Gene match (Identifier: BACU004055, Minke Whale)

Protein Percentage 96.47%
cDNA percentage 96.24%
Ka/Ks Ratio 0.16605 (Ka = 0.0199, Ks = 0.1198)

Additional orthologs identified in other species via the OPTIC pipeline.

TGFBRAP1 (Human)   Tgfbrap1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2211 bp    Location:27345..58957   Strand:+
Raw sequence 
>bmy_08574
ATGATGAGCACCAAGGCCTTCACCCTGGTCCCCGCCGTCGAGCGGGAGCAGCTGATGGGCGACAGGGAGCGGGTGTCCCTGGAGTGCGTGGAGTGCTGCGGCCGGAACCTGTACGTGGGCACCAGCGACTGCTTCGTGTACCGCTTCCTGCTGGAGGAGAAGACCGTGCCCGGCGGGTCGGCCACGTTCACGGCCACCAAGCAGCTGCACAGACACCTGGGTTTCAAGAAACCGGTGAATGAGCTGCGGGCGGCGTCGGCCCTCCACCGGCTGCTGGTGCTCTGTGACGGCTCCATCACCCTGGTCCACATGCTGAGCCTGGAGCCCGTGCCCTCGGGTGCCCGCATCAAGGGGGCCACGGCCTTCGCCTTGAACGAGAACCCGGTGAGCGGAGACCCCTTCTGCGTGGAGGTCTGCATCATCTCCGTCAAGCGCAGAACCATCCAGGTGTTCCTGGTGTACGAGGACCGCGTGCAGATCGTCAGGGAGGTGTCCACTCCGGAGCAGCCCCTGGCAGTGGCGGTGGACGGCCACTTCCTGTGCCTGGCCCTGACCACCCAGTACATCATCCTCAACTATAGCACGGGCGTCGCCCAGGACCTGTTTCCCTTCTGCAGCGAGGAGAAGCGGCCCATCGTCAAGAGGATAGGGAGACAGGAGTTCCTCCTGGCAGGCCCCGGCGGATTGGGCATGTTTGCCACGGTGGCCGGGATATCTCAGCGCGCGCCCGTGCGCTGGTCGGAGAACGTGGTTGGAGCRGCCGTCTGCTTCCCATACGTCATTGCCCTCGACAACGAGTTCATCACCGTTCACAGCATGCTGGACCAGCAGCAAAAGCAGACCCTGCCCTTTAAGGAAGGTCACATCCTCCAGGATTTTGAAGGAAGAGTCATCGTTGCCACGAGTAAAGGAGTTTACGTCTTGGTTCCGTTACCTCTGGAAAAACAAATACAGGATCTTCTAGCAAGCCGGAGAGTGGAGGAGGCTCTGATTCTAGCGAAAGGCGCCCGGAGGAACATTCCAAAGGAAAAATTTCAGGTCATGTACCGGCGGATCCTGCAGCAGGCGGGCTTCATACAGTTTGCACAGCTTCAGTTCCTGGAGGCTAAAGAACTCTTCAGAAGCGGCCAGCTGGACGTGCGGGAGCTGATCTCGCTGTACCCCTTCCTGCTGCCCACGTCCTCCTCGTTCACCCGGTCCCACCCTCCTCTGCACGAGTTCGCAGACCTCAACCAGCTGACCCAGGGCGACCAGGAGAAGGTGGCCAAGTGCAAGCGCTTCCTCATGAGGTACCTGAACGAAGTCCGCAGCACGGAGGTGGCCGACGGCTGCAAGGAGGACATCGACACAGCCCTGCTCAAGCTGTACACGGAGGCGGACCACGACAGCCTGCTGGACCTCCTGGTCACCGAGAACTTCTGTCTGCTCACCGACAGCGCCGCCTGGCTGGAGAAGCACAAGAAGTACTTTGCACTGGGGCTGCTCTATCATTACAACCACCAAGACGCTGCTGCCGTTCAGCTGTGGGTGAGCATCGTCAACGGGGACATTCACGACTCTACGCGCTCAGACCTGTACGAGTACATCGTGGATTTCCTCACCTACAGCCTCGACCCGGACCTCGTGTGGCAGTACGCTGACTGGGTCTTGCAGAAAAATCCGGAGGTCGGAGTTCAAGTTTTCACCAAGAGACCTGTGGACGAACAGCAGAGTAGATTTAACCCAGATGATATCATCAGTTGCCTTAAGAAATACCCGCAAGCCCTGGTTAAGTACCTAGAACATCTGGTCACGGACAGGAGACTGCAGAAGGAGGAGTACCACACGCACTTAGCCGTCCTCTACCTGGATGAGGTGCTGCAGCAGAGGCCCAGCGCCAATGGCAAGGATGCAGAAGTGACCGAGACGCAGGCGAAGCTGCGACGCCTGCTCCAGAAATCTGATTTGTACCGAGTCCACTTTCTGCTGGGTGAGTGCATCTCGCTGGATAAACGTCACCGGCGGGGGCGTCCCTGCCTTTGTTTCTTTTTGCAGATGAAGCTGAAAGGAAGCTCAGTTCGGCTCTCAGACAAAAAGCTTTGCCAGATGTGCCAAAACCCCTTTTGCGAGCCCGTGTTTGTTAGGTATCCCAGCGGTGGTCTCGTCCACACCCACTGTGCGGCCAGCAGACACACGAACCCCAGCTCCCCCAGCCCCGGGGCTCGGACTTGA

Related Sequences

bmy_08574T0 SequenceType object (3)

Length: 737 aa      View alignments
>bmy_08574T0
MMSTKAFTLVPAVEREQLMGDRERVSLECVECCGRNLYVGTSDCFVYRFLLEEKTVPGGSATFTATKQLHRHLGFKKPVNELRAASALHRLLVLCDGSITLVHMLSLEPVPSGARIKGATAFALNENPVSGDPFCVEVCIISVKRRTIQVFLVYEDRVQIVREVSTPEQPLAVAVDGHFLCLALTTQYIILNYSTGVAQDLFPFCSEEKRPIVKRIGRQEFLLAGPGGLGMFATVAGISQRAPVRWSENVVGAAVCFPYVIALDNEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVATSKGVYVLVPLPLEKQIQDLLASRRVEEALILAKGARRNIPKEKFQVMYRRILQQAGFIQFAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEFADLNQLTQGDQEKVAKCKRFLMRYLNEVRSTEVADGCKEDIDTALLKLYTEADHDSLLDLLVTENFCLLTDSAAWLEKHKKYFALGLLYHYNHQDAAAVQLWVSIVNGDIHDSTRSDLYEYIVDFLTYSLDPDLVWQYADWVLQKNPEVGVQVFTKRPVDEQQSRFNPDDIISCLKKYPQALVKYLEHLVTDRRLQKEEYHTHLAVLYLDEVLQQRPSANGKDAEVTETQAKLRRLLQKSDLYRVHFLLGECISLDKRHRRGRPCLCFFLQMKLKGSSVRLSDKKLCQMCQNPFCEPVFVRYPSGGLVHTHCAASRHTNPSSPSPGART*