Part of scaffold_388 (Scaffold)

For more information consult the page for scaffold_388 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TOR1A ENSTTRG00000006536 (Bottlenosed dolphin)

Gene Details

torsin family 1, member A (torsin A)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006184, Bottlenosed dolphin)

Protein Percentage 92.15%
cDNA percentage 93.11%
Ka/Ks Ratio 0.44826 (Ka = 0.0584, Ks = 0.1304)

TOR1A ENSBTAG00000020305 (Cow)

Gene Details

torsin-1A precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027059, Cow)

Protein Percentage 97.66%
cDNA percentage 94.09%
Ka/Ks Ratio 0.03902 (Ka = 0.0104, Ks = 0.2663)

TOR1A  (Minke Whale)

Gene Details

torsin family 1, member A (torsin A)

External Links

Gene match (Identifier: BACU016220, Minke Whale)

Protein Percentage 86.49%
cDNA percentage 89.53%
Ka/Ks Ratio 0.55598 (Ka = 0.0988, Ks = 0.1777)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 900 bp    Location:293738..303174   Strand:+
>bmy_08583
ATGAAGCTGGGCCGGGCCGCACTGGGCCTGGTGCTGCTGGCGCCGTTGGCGGTGCGGGCGGTGGAGCCCATCAGCCTGGGACTGGCCCTGGCCGGCGTCCTCACCGGCTACATCTCCTACCCGCGCCTCTACTGCCTGTTCGCCGAGTGCTGCAGCCAGAAGCAGAGCCTCAGCCGAGACGCGCTGCAGAAGGATCTGGACAGCAAGCTCTTTGGACAGCATCTTGCAAAGAAAGTCATCTTAAATGCTGTGTCTGGCTTCATAAGCAACCCGAAGCCCAAGAAACCTCTCACCCTCTCCCTACACGGGTGGACGGGCACCGGCAAAAATTTTGTCAGCAAGATCATCGCAGAGAATATTTACGAGGGTGGTCTGAACAGTGACTACGTCCACCTGTTTGTGGCCACACTGCACTTCCCTCACGATCAGTTACAGTCGTGGATTCGCGGCAATGTGAGTGCCTGTGCGAGGTCCATCTTCATATTTGATGAGATGGACAAGATGCATGCTGGCCTCATAGATGCCATCAAGCCTTACCTAGACTATTATGACAACTTGGATGGCGTCTCCTATCAGAAAGCCATCTTCATGTTTCTCAGCAATGCTGGAGCAGAAAGGATCACAGACGTGGCTTTAGATTTCTGGAGAAGTGGCTTCTGGCACAGCAGCTTAATTGACCGAAATCTCATTGATTATTTTGTTCCCTTCCTCCCCCTGGAATATAAACACCTAAAAATGTGCATCCGAGTCGAAATGCAGTCCCGAGGCTACAAAGTTGACGAGGACATTGTAAGCAGAGTGGCCGAGGAGATGACATTTTTCCCCAAAGAGGAGAGAGTTTTCTCTGACAAAGGCTGCAAAACTGTGTTCACCAAGTTAGATTATTACTACGATGACTGA

Related Sequences

bmy_08583T0 Protein

Length: 300 aa      View alignments
>bmy_08583T0
MKLGRAALGLVLLAPLAVRAVEPISLGLALAGVLTGYISYPRLYCLFAECCSQKQSLSRDALQKDLDSKLFGQHLAKKVILNAVSGFISNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHDQLQSWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPYLDYYDNLDGVSYQKAIFMFLSNAGAERITDVALDFWRSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGYKVDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYYDD*