Part of scaffold_388 (Scaffold)

For more information consult the page for scaffold_388 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRRX2 ENSTTRG00000006528 (Bottlenosed dolphin)

Gene Details

paired related homeobox 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006176, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 98.92%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0804)

PRRX2 ENSBTAG00000002936 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003817, Cow)

Protein Percentage 97.45%
cDNA percentage 94.27%
Ka/Ks Ratio 0.01789 (Ka = 0.0099, Ks = 0.555)

PRRX2  (Minke Whale)

Gene Details

paired related homeobox 2

External Links

Gene match (Identifier: BACU016223, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.81%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0112)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 534 bp    Location:384428..368834   Strand:-
>bmy_08586
ATGGGCACTGCCTTTATCTCAGCTGCTATCTGTGGGGAGCTGTGCAAGGGACCCCAAGGTGAGTGTCCCAGCCCCGGGCGCGGCGGCGCCGCCAAGCGGAAGAAGAAGCAGCGGCGGAACCGCACCACGTTCAACAGCAGCCAGCTGCAGGCGCTGGAGCGCGTGTTCGAGCGCACGCACTACCCCGACGCCTTCGTGCGGGAGGAGCTCGCCCGGCGCGTCAACCTCAGCGAGGCGCGTGTCCAGTTCCGCCGAAATGAGCGGGCCATGCTGGCCAACCGCTCAGCCTCACTGCTCAAGTCCTACAGCCAGGAAGCCGCCATCGAGCAGCCCGTGGCTCCCCGGCCCACTGCCCTGAGCCCCGATTATCTCTCCTGGACGGCCTCGTCCCCCTACAGCACGGTGCCGCCATACAGCCCAGGAGGCTCAGGCCCTGCGACCCCGGGGGTCAACATGGCCAACAGCATCGCCAGCCTCCGTCTCAAGGCCAAGGAGTTCAGCCTGCATCATAGCCAGGTGCCCACGGTGAACTGA

Related Sequences

bmy_08586T0 Protein

Length: 178 aa      View alignments
>bmy_08586T0
MGTAFISAAICGELCKGPQGECPSPGRGGAAKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQFRRNERAMLANRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGGSGPATPGVNMANSIASLRLKAKEFSLHHSQVPTVN*