Part of scaffold_388 (Scaffold)

For more information consult the page for scaffold_388 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TBC1D13 ENSTTRG00000011612 (Bottlenosed dolphin)

Gene Details

TBC1 domain family, member 13

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011012, Bottlenosed dolphin)

Protein Percentage 93.23%
cDNA percentage 92.73%
Ka/Ks Ratio 0.06438 (Ka = 0.0066, Ks = 0.1021)

TBC1D13 ENSBTAG00000012480 (Cow)

Gene Details

TBC1 domain family member 13

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016559, Cow)

Protein Percentage 96.74%
cDNA percentage 94.74%
Ka/Ks Ratio 0.05392 (Ka = 0.0138, Ks = 0.2568)

TBC1D13  (Minke Whale)

Gene Details

TBC1 domain family, member 13

External Links

Gene match (Identifier: BACU016240, Minke Whale)

Protein Percentage 98.01%
cDNA percentage 98.1%
Ka/Ks Ratio 0.24622 (Ka = 0.0116, Ks = 0.0471)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1374 bp    Location:1094391..1073586   Strand:-
>bmy_08606
CCAGACGGCAGAGCGGAGAAGCGGTGGCACGTGAACGGGGCGGGGCGGAGCAGAACGCGCGCGCCTGAGGCTGAGTTTCCGGTCGGAGGCCTTTGCCCAGCGCCCCGCGGCCCTGAGGGGCGGCGGCGCTGGCGGCGGCGGAGGCAGCGGGGGGATCCGGAAGTCAACACCATGTCGAGTCTGCACAAGAGCCGGATTGCAGATTTCCAGGATGTCCTGAAGGAGCCCACGATTGCCTTGGAAAAGCTTCAGGAACTCAGTTTTAGTGGCATCCCCTGTGAGGGCGGACTGCGGTGCCTCTGCTGGAAGATTCTCTTGAACTACCTCCCCTTGGAGAGAGCGTCATGGACCTCCATCCTGGCCAAGCAGAGGGAGCTGTATTCTCAGTTCCTGAGGGAAATGATCATCCAGCCTGGCATCGCCAAGGCCAACATGGGTGTATCCAGGGAGGATGTGACCTTTGAGGACCATCCACTCAACCCTAACCCCGACAGCCGATGGAACACGTACTTCAAGGACAACGAGGTGCTGCTGCAGATCGACAAAGATGTCCGAAGGCTGTGCCCAGACATATCCTTCTTCCAGAGGGCCACCGAGTACCCCTGCCTCCTCATCCTGGATCCGCAGAATGAGTTCGAGACCCTTCGTAAGCGGGTGGAACAGACGACACTGAAATCCCAGACGGTGGCCCGGAACCGGAGYGGGGTCACAAATATGAGTTCCCCACACAAGAACGCGGCGCCCTCATCCCTGAACGCGTATGAGGTGCTGCCCAACGGCTGCGAGGCCCACTGGGAGGTCGTGGAGCGGATTCTGTTCATCTACGCCAAGCTCAACCCTGGCATCGCTTACGTGCAGGGCATGAATGAGATCGTGGGGCCCCTGTACTACACCTTTGCCACCGACCCCAACAGCGAGTGGAAAGAGCACGCCGAGGCGGACACCTTTTTCTGCTTCACCAACCTCATGGCTGAGATCCGGGACAACTTCATCAAGAGCCTTGACGACTCACAGTGTGGCATCACCTACAAGATGGAAAAGGTGTATTCCACACTGAAGGATAAGGACATGGAACTCTACCTGAAACTGCAAGAGCAGAATATCAAGCCCCAGTTCTTCGCCTTCCGCTGGCTGACACTGCTGCTGTCCCAGGAGTTCTTGCTGCCTGATGTCATCCGGATCTGGGACTCCCTGTTTGCCGACAACAGCCGCTTTGATTTCCTCCTTCTGGTCTGCTGCGCCATGCTCATACTGATCCGGGAGCAGTTGCTGGAAGGGGACTTTACCGTAAACATGCGGCTCCTGCAGGATTACCCCATCACAGACATCTGCCAGATCCTACAGAAAGCCAAGGAACTCCAAGACTCACAATAG

Related Sequences

bmy_08606T0 Protein

Length: 458 aa      View alignments
>bmy_08606T0
PDGRAEKRWHVNGAGRSRTRAPEAEFPVGGLCPAPRGPEGRRRWRRRRQRGDPEVNTMSSLHKSRIADFQDVLKEPTIALEKLQELSFSGIPCEGGLRCLCWKILLNYLPLERASWTSILAKQRELYSQFLREMIIQPGIAKANMGVSREDVTFEDHPLNPNPDSRWNTYFKDNEVLLQIDKDVRRLCPDISFFQRATEYPCLLILDPQNEFETLRKRVEQTTLKSQTVARNRSGVTNMSSPHKNAAPSSLNAYEVLPNGCEAHWEVVERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAEIRDNFIKSLDDSQCGITYKMEKVYSTLKDKDMELYLKLQEQNIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADNSRFDFLLLVCCAMLILIREQLLEGDFTVNMRLLQDYPITDICQILQKAKELQDSQ*