Sequence detailsbmy_08615 (Coding sequence)

Part of scaffold_386 (SequenceType object (1))

For more information consult the page for scaffold_386 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC8A1ENSTTRG00000010365 (Bottlenosed dolphin)

Gene Details

solute carrier family 8 (sodium/calcium exchanger), member 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009835, Bottlenosed dolphin)

Protein Percentage 99.29%
cDNA percentage 97.7%
Ka/Ks Ratio 0.04659 (Ka = 0.0035, Ks = 0.0745)

SLC8A1ENSBTAG00000013861 (Cow)

Gene Details

sodium/calcium exchanger 1 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022795, Cow)

Protein Percentage 98.76%
cDNA percentage 94.87%
Ka/Ks Ratio 0.03206 (Ka = 0.0061, Ks = 0.1903)

SLC8A1 (Minke Whale)

Gene Details

solute carrier family 8 (sodium/calcium exchanger), member 1

External Links

Gene match (Identifier: BACU001611, Minke Whale)

Protein Percentage 99.82%
cDNA percentage 99.23%
Ka/Ks Ratio 0.03508 (Ka = 0.0009, Ks = 0.0246)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC8A1 (Human)   Slc8a1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1698 bp    Location:274063..275760   Strand:+
Raw sequence 
>bmy_08615
ATGAAAGGAGAAGGCAATGAAACCAGCGAGTGTACTGGCTCCTATTACTGTAAGAAAGGGGTGATTTTACCCATTTGGGAGCCCCAAGACCCTTCCTTTGGGGACAAAATTGCTAGAGCGACTGTATATTTCGTGGCCATGGTCTACATGTTTCTCGGAGTCTCTATCATTGCCGACCGATTCATGTCCTCTATAGAAGTCATCACGTCTCAAGAAAAAGAAATCACCATAAAGAAACCCAATGGAGAGACCACCAAGACAACTGTGAGGATCTGGAATGAGACGGTGTCCAACCTGACCTTGATGGCCCTGGGATCTTCAGCTCCAGAGATTCTCCTTTCAGTAATTGAGGTGTGTGGCCATAACTTCAATGCAGGAGACCTCGGTCCTAGCACCATTGTGGGGAGTGCCGCATTCAATATGTTCATCATTATTGCACTTTGTGTTTACGTCGTCCCAGATGGGGAGACAAGGAAGATTAAGCATTTGCGTGTGTTCTTTGTGACAGCAGCCTGGAGCATCTTTGCCTATACCTGGCTTTACATCATTTTGTCTGTCATCTCTCCTGGGGTCGTGGAGGTCTGGGAAGGTTTGCTTACTTTCTTCTTCTTTCCCATCTGTGTTGTGTTCGCTTGGGTGGCAGATAGGAGGCTTCTGTTTTACAAGTATGTCTACAAGAGGTACCGGGCTGGCAAGCAGAGGGGAATGATTATTGAACATGAAGGAGACAGGCCATCTTCCAAGACAGAAATTGAGATGGATGGGAAAGTGGTCAATTCCCACGTTGACAGTTTCTTAGATGGTGCTCTAGTTCTGGAAGTCGATGAGAGGGACCAAGATGATGAAGAAGCCAGGCGAGAAATGGCTAGGATTTTGAAGGAACTCAAACAGAAGCATCCGGAGAAGGAAATAGAGCAATTAATAGAATTGGCCAACTACCAAGTCTTAAGTCAGCAGCAAAAAAGTCGAGCATTCTACCGAATTCAAGCTACCCGCCTGATGACCGGGGCGGGCAACATTTTAAAGAGGCATGCAGCTGACCAAGCCAGGAAGGCCGTCAGCATGCACGAGGTCAACACGGAAGTGGCTGAAAATGACCCTGTCAGTAAGATCTTCTTTGAACAAGGAACATATCAGTGTCTGGAGAACTGTGGTACAGTAGCCCTGACCATTATCCGCAGAGGTGGTGATTTGACCAACACTGTGTTTGTTGACTTCAGAACAGAGGATGGCACAGCCAATGCCGGGTCTGATTACGAATTTACCGAAGGAACTGTGGTCTTTAAGCCTGGTGAGACCCAGAAGGAAATCAGAGTTGGCATCATCGATGATGACATCTTTGAGGAAGATGAGAATTTCCTTGTGCATCTCAGCAATGTCAAAGTATCTTCTGAAGCCTCGGAAGATGGCATCCTGGAAGTCAATCATGTCTCTACACTTGCTTGCCTGGGATCTCCCTCCACTGCCACCGTGACTATTTTTGATGATGACCACGCAGGCATCTTTACTTTTGAGGAACCTGTGACTCACGTGAGTGAGAGCATTGGCATCATGGAGGTGAAAGTATTGAGAACATCTGGAGCACGCGGAAATGTTATCGTTCCCTATAAAACCATTGAAGGGACCGCCAGAGGCGGAGGGGAGGACTTTGAGGACACGTGCGGAGAGCTCGAGTTCCAGAACGACGAAATTGTGTAA

Related Sequences

bmy_08615T0 SequenceType object (3)

Length: 566 aa      View alignments
>bmy_08615T0
MKGEGNETSECTGSYYCKKGVILPIWEPQDPSFGDKIARATVYFVAMVYMFLGVSIIADRFMSSIEVITSQEKEITIKKPNGETTKTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFNAGDLGPSTIVGSAAFNMFIIIALCVYVVPDGETRKIKHLRVFFVTAAWSIFAYTWLYIILSVISPGVVEVWEGLLTFFFFPICVVFAWVADRRLLFYKYVYKRYRAGKQRGMIIEHEGDRPSSKTEIEMDGKVVNSHVDSFLDGALVLEVDERDQDDEEARREMARILKELKQKHPEKEIEQLIELANYQVLSQQQKSRAFYRIQATRLMTGAGNILKRHAADQARKAVSMHEVNTEVAENDPVSKIFFEQGTYQCLENCGTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPGETQKEIRVGIIDDDIFEEDENFLVHLSNVKVSSEASEDGILEVNHVSTLACLGSPSTATVTIFDDDHAGIFTFEEPVTHVSESIGIMEVKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEFQNDEIV*