Sequence details bmy_08632 (Coding sequence)

Part of scaffold_383 (Scaffold)

For more information consult the page for scaffold_383 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCIMP ENSTTRG00000010884 (Bottlenosed dolphin)

Gene Details

SLP adaptor and CSK interacting membrane protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010316, Bottlenosed dolphin)

Protein Percentage 90.37%
cDNA percentage 93.83%
Ka/Ks Ratio 1.15874 (Ka = 0.0631, Ks = 0.0545)

SCIMP ENSBTAG00000035975 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000047167, Cow)

Protein Percentage 81.02%
cDNA percentage 89.29%
Ka/Ks Ratio 0.72324 (Ka = 0.1068, Ks = 0.1477)

SCIMP  (Minke Whale)

Gene Details

SLP adaptor and CSK interacting membrane protein

External Links

Gene match (Identifier: BACU001300, Minke Whale)

Protein Percentage 96.5%
cDNA percentage 97.67%
Ka/Ks Ratio 0.43058 (Ka = 0.0152, Ks = 0.0353)

Additional orthologs identified in other species via the OPTIC pipeline.

SCIMP (Human)   Scimp (Mouse)  

Genome Location

Sequence Coding sequence

Length: 432 bp    Location:880935..888039   Strand:+
Raw sequence 
>bmy_08632
ATGGCAATGGATTGGTGGAGGGACAATTTCTGGATCATCTTGGCTGTGGCCATCATCTTWGTCTCCGTGGGCCTGAGCATCTTCCTGTTCTGTGTCTGTAGGCATCTGTTTAGACAAGGCAAGAAATGGGAAATTACCAAGCCCTTGAAACAAAAGCAGAGAGATGAAGAAACGATGTATGAGAATGTTACCAATCAATTCTCAGTTCAATTACCCCCTCTGCCACCCAGGGGTGTGCTTTCTCCAGAAGTTGCCTCCCCACAGGAAACCCTAAGTCGGCCACCAGCTGCATACTCATCAGTAAATAAAGTTAGAAATAAGAAGACAATGGCCGTCCCAAGCTACATTGAGCCTGAAGATGACTATGATGACGTTGATAACCCTGCACATACGGAAAACCATCATCTTGAAACAACCGTTTCTTCTTTTTGA

Related Sequences

bmy_08632T0 Protein

Length: 144 aa      View alignments
>bmy_08632T0
MAMDWWRDNFWIILAVAIIXVSVGLSIFLFCVCRHLFRQGKKWEITKPLKQKQRDEETMYENVTNQFSVQLPPLPPRGVLSPEVASPQETLSRPPAAYSSVNKVRNKKTMAVPSYIEPEDDYDDVDNPAHTENHHLETTVSSF*