Sequence detailsbmy_08645 (Coding sequence)

Part of scaffold_383 (SequenceType object (1))

For more information consult the page for scaffold_383 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHRNEENSTTRG00000000255 (Bottlenosed dolphin)

Gene Details

cholinergic receptor, nicotinic, epsilon (muscle)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000239, Bottlenosed dolphin)

Protein Percentage 95.98%
cDNA percentage 97.57%
Ka/Ks Ratio 0.3413 (Ka = 0.0175, Ks = 0.0513)

CHRNEENSBTAG00000004908 (Cow)

Gene Details

Acetylcholine receptor subunit epsilon

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000042804, Cow)

Protein Percentage 92.06%
cDNA percentage 92.19%
Ka/Ks Ratio 0.12396 (Ka = 0.0379, Ks = 0.3058)

CHRNE (Minke Whale)

Gene Details

cholinergic receptor, nicotinic, epsilon (muscle)

External Links

Gene match (Identifier: BACU001286, Minke Whale)

Protein Percentage 97.48%
cDNA percentage 98.32%
Ka/Ks Ratio 0.23644 (Ka = 0.01, Ks = 0.0421)

Additional orthologs identified in other species via the OPTIC pipeline.

CHRNE (Human)   Chrne (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1572 bp    Location:1110483..1115573   Strand:+
Raw sequence 
>bmy_08645
ATGGCAGGGACTCTGCTCAGCGCCCTGCTCCTCTTGCAGCTCCTCGGCGGAGGTGAAGGGAAGAACGAGGAGCTGCGTCTTTACCACCACCTCTTCGACAACTACGACCCAGGACGCCGGCCAGTGCAGAAGCCTGGGGACACCGTCACCATCACCCTCAAAGTCACCCTGACCAACCTCATCTCACTGAATGAGAAAGAGGAGACCCTCACCACCAGCGTCTGGATTGGAATCGACTGGCATGATTACCGACTCAACTACAGCAAGGGCGATTTTGGGGGCATAGAAACCCTGCGGGTCCCTTCAGAACTCGTATGGCTGCCAGAGATTGTGCTGGAAAACAATATCGACGGCCAGTTCGGTGTGGCCTATGAAGCCAACGTGCTGGTCTCGGAGGGCGGCTACATGAGCTGGCTGCCCCCGGCCATCTACCGCAGTATCTGCGCCGTGGAGGTCACCTACTTCCCTTTCGACTGGCAGAACTGCTCGCTTGTTTTCCGCTCGCAGACATACAATGCAGAAGAGGTGGAGCTCGTCTTTGCTGTGGACGACGATGGTGACACCATCAGCAATATAGATATCGACACTGAGGCCTATACTGAGAACGGTGAGTGGGCCATCAACTTCTGCCCCGGGGTGATCCGCCGCCACGACGGTGGCTCTGCTGATGGTCCAGGGGACACTGAAGTCATCTACACGCTCATCATTCGCCGGAAGCCGCTCTTCTACGTTATTAACATCATCGTGCCTTGCGTGCTCATCTCGGGCCTAGTGCTGCTCGCCTATTTCCTGCCGGCACAGGCCGGCGGCCAGAAATGCACCGTCTCCATCAACGTCCTGCTCGCCCAGACCGTCTTCTTGTTCCTAATTGCCCAGAAAATCCCAGAGACATCTCTGAGCGTGCCGCTGCTGGGCAGGTACCTCATTTTCGTCATGGTGGTTGCCACGYTCATTGTCATGAATTGCGTCATCGTGCTCAACGTGTCTTATCGGACGCCCACCACACACGCCATGTCCCCGCGGCTGCGCCACGTAAGCACCGTGTGTGTGGGGGGGGGCTCCGGCCGGGAGGCGGGGCTTCGAGCTAACCTCCCCGCCGCCCCACCCCGGCCGGCCGCCCGCCCCCAGGTCTTACTGGAGCTGCTGCCCCAACTCCTGGGCTCGGGCGCACTCCCCGAGGTCCCCCGGGCCGCCTCGCCCCCAAGGCGGGCGTCGTCCTTGGGCCTACTGCTCCTCGCGGAGGAGCTGATACTGAAAAAGCTGCGGAGCGAGCTCATGTTTGAGGGGCAGAGGTACCGGCACGGGACCTGGACTGCTGCCCTCTGCCAGAACCTGGGCGCCGCCGCCCCCGAGATCCGCTGCTGTGTGGATGCCGTGAACTTCGTGGCCGAGAGCACGCGAGACCAGGAGGCCACCGGCAAGGAGGTGTCCGACTGGGTGCGCATGGGGAAGGCCCTTGACAACATCTGCTTCTGGGCCGCTCTGGTGCTCTTCCTTGTCGGCTCCAGCCTCATCTTCCTCGGGGCCTACTTCAACCAAGTGCCCGAACTGCCCTACCCGCCCTGTATGTAG

Related Sequences

bmy_08645T0 SequenceType object (3)

Length: 524 aa      View alignments
>bmy_08645T0
MAGTLLSALLLLQLLGGGEGKNEELRLYHHLFDNYDPGRRPVQKPGDTVTITLKVTLTNLISLNEKEETLTTSVWIGIDWHDYRLNYSKGDFGGIETLRVPSELVWLPEIVLENNIDGQFGVAYEANVLVSEGGYMSWLPPAIYRSICAVEVTYFPFDWQNCSLVFRSQTYNAEEVELVFAVDDDGDTISNIDIDTEAYTENGEWAINFCPGVIRRHDGGSADGPGDTEVIYTLIIRRKPLFYVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSVPLLGRYLIFVMVVATXIVMNCVIVLNVSYRTPTTHAMSPRLRHVSTVCVGGGSGREAGLRANLPAAPPRPAARPQVLLELLPQLLGSGALPEVPRAASPPRRASSLGLLLLAEELILKKLRSELMFEGQRYRHGTWTAALCQNLGAAAPEIRCCVDAVNFVAESTRDQEATGKEVSDWVRMGKALDNICFWAALVLFLVGSSLIFLGAYFNQVPELPYPPCM*