Part of scaffold_390 (Scaffold)

For more information consult the page for scaffold_390 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

THSD7A ENSTTRG00000010447 (Bottlenosed dolphin)

Gene Details

thrombospondin, type I, domain containing 7A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009923, Bottlenosed dolphin)

Protein Percentage 89.61%
cDNA percentage 90.08%
Ka/Ks Ratio 0.30729 (Ka = 0.0199, Ks = 0.0647)

THSD7A ENSBTAG00000007680 (Cow)

Gene Details

thrombospondin type-1 domain-containing protein 7A precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010106, Cow)

Protein Percentage 89.8%
cDNA percentage 89.62%
Ka/Ks Ratio 0.21934 (Ka = 0.0625, Ks = 0.2848)

THSD7A  (Minke Whale)

Gene Details

thrombospondin, type I, domain containing 7A

External Links

Gene match (Identifier: BACU014779, Minke Whale)

Protein Percentage 25.31%
cDNA percentage 38.14%
Ka/Ks Ratio 0.08345 (Ka = 1.0417, Ks = 12.4825)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3810 bp    Location:85280..221624   Strand:+
>bmy_08692
ATGGAGGGCAGTGCAGAGGATGCCAGCAGGCAGCTGCCCCGCCGCGTCCTCGTCTACACCACACGCCGGGCTTGCCGGGTCCTTCCCAGTCACAGGGCAGGGTCCGCAAAGACAGCCCGGCTGCCGGACAGACCCACAGACCCGATTCTTATCATGCTAAGTCACTACCAGAAGGAGAAGAAGCTAGGATGGGTGATTGGCTGCAGGGGAAATGGGGCACAGCAGGAGGCCAGAGGAAAGTGTGAAATGGTGTGGAAGAGAACATGGGGAGAAGAAGTTGACAGACAGCTGTGCAGAGACGCCATCTTCCCCATCCCTGTTGCCTGCGATGCCCCGTGCACCAAGGACTGTGTGCTCAGCATGTGGTCTGCGTGGTCTTCCTGCTCCCACACCTGCTCAGGGAAAACCACAGAAGGGAAACAGATACGAGCGCGGTCCATCCTGGCCTATGCAGGAGAGGAAGGCTCTGTATCTCTCTTCCTGAACAATTTTATCTGCAAAATCATTAAGTGGAACCAAGCAGTTGAGCATCTGTGCCAGCAGTGGTCTGCTATCAAAGTGATTAGGGCTGCAGTAGCAGGCAAAGTTACAAGTGGAGCTCAGTGTCCAAATAGCAGTGCTTTGCAAGAGGTGCGCAGCTGTAACGAGCATCCCTGTACTGTGTACCACTGGCAAACTGGTCCCTGGGGCCAGTGCATCGAGGACACCTCAGTTTCATCCTTCAACACAACTACAACTTGGAACGGGGAGACCTCTTGCTCTGTTGGCATGCAGACAAGAAAAGTCATCTGTGTGCGGGTCAATGTTGGCCAAGTGGGACCCAAAAAGTGTCCTGAAAGCCTTCGACCTGAAACAGTGAAGCCCTGTCTGCTTCCTTGTAGGAAGGACTGTATCGTGACGCCATACAGTGACTGGACATCATGCCCTTCCTCATGTAAAGAAGGTGTTATGGCTTTGGAATGTTCCACTTTAATCAGGTCACAATCTCTATCCTGTGGGCTGTGCAAGGTTAAGCAATACTGTCAATTTGATATCTTCATCGAAGGGGACTCCGGAATCAGGAAGCAGACTCGGCACCGGGTCATCATTCAGCTGCCGGCCAACGGAGGCAAGGACTGCACGGATCCTCTCTATGAAGAGAAGGCCTGCGAGACCCCTCAAGTGTGCCAAAGCTACAGGTGGAAGACTCACAAATGGCGCAGGTGCCAGTTAGTCCCTTGGAGCGTGCAACAGGACAGCCCTGGAGCGCAGGAGGGCTGTGGGCCCGGACGGCAGGCAAGAGCCATTACTTGTCGAAAGCAAGATGGTGGACAGACTGGTATCCATGAATGTCTCCGGTACGCAGGCCCCRTGCCAGCCCTCACCCAAGCCTGCCAGATCCCCTGCCAAGATGACTGTCAGTTTACCAGCTGGTCCAAGTTTTCTTCATGCAATGGAGACTGTGGTGCAGTTAGGACCAGAAAGCGCACCATTGTTGGAAAAAGTAAAAAGAAGGAAAAATGTAAAAATTCTCATTTGTACCCCCTGATTGAGACGCAGTATTGTCCCTGTGACAAGTATAATGCACAGCCTGTGGGGAACTGGTCAGACTGCATTTTGCCAGAGGGGAAAGTGGAAGTGTTGCTGGGAATGAAGGTACAAGGAGACATCAAGGAATGTGGTCAAGGATATCGTTACCAAGCAATGGCGTGCTACGATCAAAATGGCAGACTCGTGGAGACATCCAGATGTAACAGCCATGACAGACTTTTCATAACCGAACTGGCAAGATTTGCGACGTACCTAAGATATCAAGTGGCAGAGGAGAAAGAAAGACTGAAAGCTGCAATTGGGACCACAGTAGATAAAGTTCTAGCTAAGTGTTCTCATTTGCGATTGCAGTCATGTGCATATAACACACATTTAAGTTACATTGAAGAGGCCTGCATCATCCCCTGCCCCTCAGACTGCAAGCTCAGTGAGTGGTCCAATTGGTCACGCTGCAGCAAGTCCTGTGGGAGTGGCRTGAAGGTTCGGTCTAAATGGCTGCGTGAAAAACCCTATAATGGAGGAAGACCATGCCCGAAACTGGACCATGTCAACCAGGTGTATGAGGTCGTCCCTTGCCACAGTGACTGCAGCCAGTACATATGGGTTACAGAGCCATGGAGCATCTGCAAGGTGACCTTTGTGAACATGCGGGACAACTGTGGAGAGGGCGTGCAAACCCGAAAAGTGAGATGCATGCAGAACACGGCGGATGGCCCTTCTGACCATGTAGAGGATTACCTCTGTGACCCAGAAGAGATGCCTCTGGGCTCTAGAGAGTGCAAATTACCATGTCCCGAGGATTGTGTGATAACTGAATGGGGTCCGTGGACCCGATGCACTTTGCCTTGCAATCAAAGCAGTTTCCGGCAAAGGTCAGCGGATCCCATCAGACAACCTGCTGATGAAGGAAGAGCCTGCCCTGATGCTGTTGAGAAGGAACCCTGTAACCTGAACAAAAACTGCTTCCACTATGATTATAATGTAACAGACTGGAGTACGTGCCAGCTGAGTGAGAAGGCAGTTTGTGGAAATGGCATGAAAACAAGGATGTTGGATTGTGTTCGAAGTGAYGGCAAGTCGGTTAACCTGAAATACTGTGAAGAGCTTGGCCTGGAGAAGAACTGGCAGATGAACACATCCTGCGTGGTGGAATGTCCTGTGAACTGTCAGCTTTCTGACTGGTCTTCTTGGTCAGAGTGTTCTCAAACATGTGGCCTCACAGGAAAAATGATCCGAAGAAGAACAGTAACCCAGCCCTTTCAGGGTGATGGAAGACCGTGCCCTGCCCTGATGGAACAGTCTAAGCCTTGCCCAGTGAAGCCCTGTTATCGGTGGCAATACAGCCAGTGGTCTGCATGCCAAGTGCAGGATGCCCAGTGTGGCGAAGGGGCCAGAACAAGGAATATTTCTTGTGTAGTGAGTGATGGGTCAGCTGATGATTTCAGCAAGGTGGTGGATGAAGAATTCTGTACTGATATTGAACCCATTATAGATGGTAATAAAAAAGTGGTTCTTGAGGAAACCTGCACCCAGCCTTGCCCAGGTGACTGTTATTTGAAGGAGTGGTCTTCCTGGAGCCTGTGTCAGCTGACCTGTGTGAATGGTGAGGACCTAGGTTTTGGTGGAATACAGGTCCGTTCCAGAGCGGTGATTATACAAGAGCTAGAGAATCAACATCTGTGCCCAGAGCAGATGTTAGAAACAAAATCATGTGATGATGGACAGTGTTACGAGTATAAATGGATGGCTAGTGCTTGGAAGGGCTCTTCCCGAACAGTCTGGTGTCAAAGATCAGATGGTATAAATGTAACAGGGGGCTGCTTGGTGGTGCGCCAGCCTGATGCTGACAGGTCTTGTAATCCACCGTGTAGTCAACCCCACTCGTACTGTAGCGAGACAAGGATATGCAGTTGTGAAGAAGGGTACACTGAAGTCATGTCTTCCAATGGTACACTTGAGCAATGCACACTTATCCCCGTGGTGGTGATACCCACCGTGGAGGACAAAAGAGGAGATGTGAAAACCAGTCGGGCAGTACATCCAACCCAACCCTCCAGTAACCCAGCAGGACGGGGAAGGACCTGGTTTCTACAGCCATTTGGGCCAGATGGGAGACTAAAGACCTGGGTTTACGGTGTAGCAGCTGGGGCATTTGTGTTACTCATCTTCATTGTCTCCATGATCTATCTAGCTTGCAAAAAGCCAAAGAAACCCCAAAGAAGGCAAAACAACCGACTGAAACCTTTAACCTTAGCCTATGATGGAGATGCAGACATGTAA

Related Sequences

bmy_08692T0 Protein

Length: 1270 aa      View alignments
>bmy_08692T0
MEGSAEDASRQLPRRVLVYTTRRACRVLPSHRAGSAKTARLPDRPTDPILIMLSHYQKEKKLGWVIGCRGNGAQQEARGKCEMVWKRTWGEEVDRQLCRDAIFPIPVACDAPCTKDCVLSMWSAWSSCSHTCSGKTTEGKQIRARSILAYAGEEGSVSLFLNNFICKIIKWNQAVEHLCQQWSAIKVIRAAVAGKVTSGAQCPNSSALQEVRSCNEHPCTVYHWQTGPWGQCIEDTSVSSFNTTTTWNGETSCSVGMQTRKVICVRVNVGQVGPKKCPESLRPETVKPCLLPCRKDCIVTPYSDWTSCPSSCKEGVMALECSTLIRSQSLSCGLCKVKQYCQFDIFIEGDSGIRKQTRHRVIIQLPANGGKDCTDPLYEEKACETPQVCQSYRWKTHKWRRCQLVPWSVQQDSPGAQEGCGPGRQARAITCRKQDGGQTGIHECLRYAGPXPALTQACQIPCQDDCQFTSWSKFSSCNGDCGAVRTRKRTIVGKSKKKEKCKNSHLYPLIETQYCPCDKYNAQPVGNWSDCILPEGKVEVLLGMKVQGDIKECGQGYRYQAMACYDQNGRLVETSRCNSHDRLFITELARFATYLRYQVAEEKERLKAAIGTTVDKVLAKCSHLRLQSCAYNTHLSYIEEACIIPCPSDCKLSEWSNWSRCSKSCGSGXKVRSKWLREKPYNGGRPCPKLDHVNQVYEVVPCHSDCSQYIWVTEPWSICKVTFVNMRDNCGEGVQTRKVRCMQNTADGPSDHVEDYLCDPEEMPLGSRECKLPCPEDCVITEWGPWTRCTLPCNQSSFRQRSADPIRQPADEGRACPDAVEKEPCNLNKNCFHYDYNVTDWSTCQLSEKAVCGNGMKTRMLDCVRSDGKSVNLKYCEELGLEKNWQMNTSCVVECPVNCQLSDWSSWSECSQTCGLTGKMIRRRTVTQPFQGDGRPCPALMEQSKPCPVKPCYRWQYSQWSACQVQDAQCGEGARTRNISCVVSDGSADDFSKVVDEEFCTDIEPIIDGNKKVVLEETCTQPCPGDCYLKEWSSWSLCQLTCVNGEDLGFGGIQVRSRAVIIQELENQHLCPEQMLETKSCDDGQCYEYKWMASAWKGSSRTVWCQRSDGINVTGGCLVVRQPDADRSCNPPCSQPHSYCSETRICSCEEGYTEVMSSNGTLEQCTLIPVVVIPTVEDKRGDVKTSRAVHPTQPSSNPAGRGRTWFLQPFGPDGRLKTWVYGVAAGAFVLLIFIVSMIYLACKKPKKPQRRQNNRLKPLTLAYDGDADM*