Part of scaffold_391 (Scaffold)

For more information consult the page for scaffold_391 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CPSF2 ENSTTRG00000008697 (Bottlenosed dolphin)

Gene Details

cleavage and polyadenylation specific factor 2, 100kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008244, Bottlenosed dolphin)

Protein Percentage 87.44%
cDNA percentage 86.79%
Ka/Ks Ratio 0.10967 (Ka = 0.0061, Ks = 0.0554)

CPSF2 ENSBTAG00000010227 (Cow)

Gene Details

Cleavage and polyadenylation specificity factor subunit 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013500, Cow)

Protein Percentage 99.36%
cDNA percentage 94.67%
Ka/Ks Ratio 0.01445 (Ka = 0.003, Ks = 0.2094)

CPSF2  (Minke Whale)

Gene Details

cleavage and polyadenylation specific factor 2, 100kDa

External Links

Gene match (Identifier: BACU010726, Minke Whale)

Protein Percentage 98.52%
cDNA percentage 97.86%
Ka/Ks Ratio 0.19502 (Ka = 0.0092, Ks = 0.0472)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2349 bp    Location:169780..199744   Strand:+
>bmy_08698
ATGACGTCTATTATCAAATTAACTACCCTTTCTGGGGTCCAGGAAGAGTCTGCTCTTTGCTATCTTCTCCAAGTCGATGAGTTTAGATTTTTACTGGACTGCGGCTGGGATGAGCACTTTTCTATGGATATCATAGATTCCCTGAGGAAGCAYGTTCACCAGATTGATGCAGTACTGTTGTCTCACCCCGATCCTCTCCATCTTGGCGCCCTTCCATATGCTGTYGGAAAGTTGGGTCTGAACTGTGCTATCTATGCAACCATTCCTGTTTATAAAATGGGGCAGATGTTCATGTATGATCTTTATCAGTCCCGACACAATACAGAAGATTTTACACTCTTTACACTAGATGATGTGGATGCAGCCTTTGATAAAATACAGCAGTTAAAATTCTCTCAGATTGTGAATTTGAAAGGTAAAGGACATGGCTTGTCTATCACACCTCTGCCAGCTGGTCATATGATAGGTGGAACAATATGGAAAATAGTCAAAGATGGAGARGAAGAAATTGTTTATGCAGTTGACTTCAACCACAAGAGGGAGATCCACTTAAATGGATGTTCCCTGGAAATGCTAAGCAGACCCTCTCTACTTATCACAGATTCATTTAATGCTACGTATGTGCAGCCCAGGAGAAAACAAAGAGACGAGCAACTTCTGACAAATGTCCTGGAAACACTTCGAGGTGATGGAAATGTGTTAATAGCAGTGGACACTGCAGGCAGAGTTTTGGAACTTGCTCAACTCCTTGATCAAATTTGGAGAACTAAAGATGCAGGATTGGGTGTTTACTCATTGGCACTCCTAAATAATGTCAGTTATAATGTGGTGGAGTTTTCTAAGTCCCAGGTAGAATGGATGAGTGATAAATTGATGAGATGTTTTGAAGACAAAAGAAATAATCCATTTCAGTTTCGTCATCTCTCTCTATGTCATGGTCTTTCTGACTTGGCTCGAGTACCTAGCCCTAAAGTGGTACTTGCCAGCCAGCCCGACCTGGAATGTGGATTTTCAAGGGATCTCTTTATTCAGTGGTGCCAGGACCCTAAAAACTCGATCATTCTAACTTACAGAACTACTCCTGGGACTTTAGCACGTTTCCTAATTGATAATCCTTCTGAAAAAATTACAGAAATAGAGTTGAGGAAACGTGTGAAACTTGAAGGGAAGGAACTTGAAGAATACTTGGAAAAAGAGAAACTAAAGAAAGAAGCTGCTAAAAAACTTGAACAGTCAAAAGAGGCAGACATAGATTCTAGTGATGAGAGTGACGTTGAGGAAGATATTGACCAGCCATCAGCTCATAAGACTAAGCATGACCTGATGATGAAAGGTGAAGGTAGTCGTAAAGGAAGCTTCTTCAAACAGGCTAAAAAGTCTTATCCTATGTTTCCTGCCCCAGAAGAAAGAATTAAATGGGATGAATATGGAGAAATTATCAAACCAGAGGATTTCTTAGTGCCAGAACTTCAAGCTACTGAAGAAGAAAAAAGCAAATTAGAGTCTGGCCTGACAAATGGAGATGAACCCATGGATCAGGATTTATCTGATGTTCCTACTAAGTGTATTTCTACAACAGAATCTATAGAAATAAAAGCCAGGGTTACTTACATAGACTATGAAGGACGCTCYGATGGGGATTCCATTAAAAAGATCATCAACCAGATGAAACCACGGCAGCTGGTCATTGTCCACGGACCGCCAGAGGCCAGTCAGGACCTTGCGGAGTGCTGCCGTGGGTTTGGCGGGAAAGATATTAAAGTGTACATGCCAAAGCTACATGAAACAGTCGATGCCACTAGTGAAACTCATATCTACCAGGTGAGATTAAAAGATTCACTTGTCAGCTCCCTTCAGTTTTGTAAGGCAAAAGATGCTGAATTAGCTTGGATAGATGGTGTCTTAGACATGAGAGTTTCCAGAGTGGACACAGGAGTTATTTTAGAAGAAGGAGAACTAAAGGATGACGGAGAAGACTCAGAAATGCAAGTGGACGCTCCTTCAGATTCTAGCGTTATAGCACAGCAGAAGGCCATGAAAAGTCTGTTTGGAGAYGATGAGAAAGAAACAGGTGAAGAAAGTGAGATCATTCCTACTTTGGAACCCTTACCACCTCATGAGGTTCCTGGACATCAGTCAGTTTTTATGAATGAACCAAGACTGTCGGACTTCAAACAAGTTCTTTTAAGGGAGGGAATCCAAGCTGAGTTCGTAGGAGGTGTACTYGTTTGCAACAATCAAGTAGCAGTCCGTAGAACGGAAACTGGACGCATTGGATTAGAAGGCTGCCTTTGTCAAGATTTTTATAGGATAAGAGACCTTTTRTATGAACAGTATGCCATTGTGTAA

Related Sequences

bmy_08698T0 Protein

Length: 783 aa      View alignments
>bmy_08698T0
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLVIVHGPPEASQDLAECCRGFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSRVDTGVILEEGELKDDGEDSEMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYAIV*