Sequence detailsbmy_08703 (Coding sequence)

Part of scaffold_391 (SequenceType object (1))

For more information consult the page for scaffold_391 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LGMNENSTTRG00000001526 (Bottlenosed dolphin)

Gene Details

legumain

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001439, Bottlenosed dolphin)

Protein Percentage 92.53%
cDNA percentage 93.09%
Ka/Ks Ratio 0.2068 (Ka = 0.0107, Ks = 0.0518)

LGMNENSBTAG00000046979 (Cow)

Gene Details

Legumain

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053922, Cow)

Protein Percentage 91.57%
cDNA percentage 91.97%
Ka/Ks Ratio 0.15878 (Ka = 0.0412, Ks = 0.2597)

LGMN (Minke Whale)

Gene Details

legumain

External Links

Gene match (Identifier: BACU010723, Minke Whale)

Protein Percentage 96.39%
cDNA percentage 96.87%
Ka/Ks Ratio 0.33988 (Ka = 0.0217, Ks = 0.0638)

Additional orthologs identified in other species via the OPTIC pipeline.

LGMN (Human)   Lgmn (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1248 bp    Location:666795..638860   Strand:-
Raw sequence 
>bmy_08703
ATGATTTGGGAAGTCGCTGTGTTGCTCASTTTGGTCCTGGGAGTTGGTGCTATTCCTGTGGACGATCCTGAGGACGGAGGCAAGCACTGGGTGGTGATTGTCGCGGGATCAAATGGCTGGTATAATTATAGGCACCAGGCTGATGCGTGCCACGCCTACCAGATTGTTCACCGAAATGGGATTCCTGATGAGCAGATCATCGTGATGATGTATGATGACATCGCTAACTCTGAAGACAATCCCACCCCAGGAATTGTGATCAACAGGCCCAACGGCTCAGACGTGTACAAGGGGGTTCTAAAGGACTACACGGGCGAGGATGTCACCCCGCAGAATTTCCTTGCTGTGTTGAGAGGTGATGCAGAGGCAGTGAAGGGCAAAGGATCTGGAAAGGTCTTGAAGAGTGGCCCCCGGGACCACGTGTTCCTTCACGTCAAGGACCTGAATGAGACCATCCATTACATGCACAAACACAAGAGGTACCAAAAGATGGTGTTCTACATTGAAGCCTGCGAGTCTGGGTCCATGATGAGCCACCTGCCCCCCAACATCAATGTTTATGCAACTACTGCTGCCAACCCCAAGGAGTCGTCCTATGCCTGTTACTACGATGAGGCGAGGTCCACGTTCCTGGGGGACTGGTATAGCGTCAACTGGATGGAAGACTCAGACGTGGAGGATCTGACCAAAGAGACCCTCCACAAGCAGTACCAGCTGGTGAAATCCCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAGTCCATCTCTGCCATGAAGTTGATGCAGTTTCAGGGTCTGAAACACAAAGCTAGTTCTCCCATCTCCCTGCCCCGAGTCAAACACCTTGACCTCACTCCAAGCCCCGAGGTGCCCCTCACCATCATGAAAAGGAAACTGATGAGCACCAACGATCTGCAGGAGTCCAGGCGTCTYGTCAAGAAGATCGACAGGCAGCTGGAGGTCAGAAATGTCATTGAGAAGTCAGTGYGGAAGATCGTCGCCTTGATCTCAGGGTCCGATGCCGAGGTAGACAGGCTCCTGTCCCAGAGAGCCCCACTCACGGCGCACGACTGCTACCAGGCAGCCGTGTCGCACTTCCGCACGCACTGCTTCAACTGGCACAACCCCACGTACGAGTATGCTTTGAGACATTTGTACGTGTTGGTCAACCTTTGTGAAAACCCTTATCCGATTGACAGAATAAAATTGTCCATGAACAAGGTATGCCTTGGTTACTACTGA

Related Sequences

bmy_08703T0 SequenceType object (3)

Length: 416 aa      View alignments
>bmy_08703T0
MIWEVAVLLXLVLGVGAIPVDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIVHRNGIPDEQIIVMMYDDIANSEDNPTPGIVINRPNGSDVYKGVLKDYTGEDVTPQNFLAVLRGDAEAVKGKGSGKVLKSGPRDHVFLHVKDLNETIHYMHKHKRYQKMVFYIEACESGSMMSHLPPNINVYATTAANPKESSYACYYDEARSTFLGDWYSVNWMEDSDVEDLTKETLHKQYQLVKSHTNTSHVMQYGNKSISAMKLMQFQGLKHKASSPISLPRVKHLDLTPSPEVPLTIMKRKLMSTNDLQESRRLVKKIDRQLEVRNVIEKSVXKIVALISGSDAEVDRLLSQRAPLTAHDCYQAAVSHFRTHCFNWHNPTYEYALRHLYVLVNLCENPYPIDRIKLSMNKVCLGYY*