Part of scaffold_398 (Scaffold)

For more information consult the page for scaffold_398 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FAM171B ENSTTRG00000012484 (Bottlenosed dolphin)

Gene Details

family with sequence similarity 171, member B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011850, Bottlenosed dolphin)

Protein Percentage 91.39%
cDNA percentage 91.23%
Ka/Ks Ratio 0.09299 (Ka = 0.0031, Ks = 0.033)

FAM171B ENSBTAG00000001683 (Cow)

Gene Details

protein FAM171B precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002209, Cow)

Protein Percentage 94.01%
cDNA percentage 94.45%
Ka/Ks Ratio 0.1956 (Ka = 0.028, Ks = 0.1433)

FAM171B  (Minke Whale)

Gene Details

family with sequence similarity 171, member B

External Links

Gene match (Identifier: BACU019950, Minke Whale)

Protein Percentage 98.93%
cDNA percentage 99.2%
Ka/Ks Ratio 0.22731 (Ka = 0.0038, Ks = 0.0166)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2502 bp    Location:742197..677329   Strand:-
>bmy_08717
ATGGCGAGGCTCAGCCGGCGCGTCCCTTGCACCCTGCTCCTCGGCCTGGCCGCCGTGCTGCTGAAGGCGAGGCTGGTCCCTGCGGCCGCCAGAGCTGAGCTCAGCCGCTCCGACCTCAGTCTCATCCAGCAGCAGCAGCAGCAGCAGCAGCAACGGCAGCGGGAGGAAGCCGAGGAGGAGAGGCCAGAGGTGCCCGGGGCATCCTCTACCGTCACTGCTCCCGGATATAACGTGCTGCGATTTTCTTTTTCTCTTCCAGTGTCTGTATTTATGCTGAAAGTCCAGGTGAATGACATCATCAGTCGTCAGTACCTGAGTCAAGCAGTTGTAGAAGTGTTTGTAAATTACACGAAGACAAATTCCACAGTAACCAGAAACAATGGAGCAGTGTTGATAAGAGTACCCTACAAGTTAGGACTCAGCCTAACCATTATTGCTTACAAAGATGGCTATGTGTTGACACCTCTGCCTTGGAAGACTGGAAGAATGCCAATATATTCATCAGTTACACTTTCACTGTTCCCGCAAAGCCAAGCAAATATATGGCTATTTGAAGACACTGTTTTAATTACTGGAAAATTAGCTGATGCTAAATCTCAACCAAGTGTTCAGTTTTCAAAAGCCTTAATTAGACTACCCAACAGCCATCACATTAGCAACGTTACAGGCTACCTTACAGTCCTACAACAGTTTTTGAAAGTGGATAATTTTCTGTATACGAGTGGAATTACTCTCAATAAGTCAGGTTTTGAAGGCAATGAACTGACTCCTCTTGCTGCAATATGTGTGAAAATATATTCTGGAGGAAAAGAATTAAAGGTGGATGGCTCTATTCAAATTTCTCTCCCACTTCTACGTACAAATGGTRTAAGTGCAGGGGATCACATACCTGCCTGGACATTTGATATGAACACAGGTGCTTGGGTAAATCATGGCCGGGGAATGGTCAAGGAATATAACAATCATTTAATTTGGACATACGAGGCACCTCATTTGGGCTACTGGATAGCAGCTCCACTTCCAGGAACTAGAGGGTCAGGTATAAATGGAGATTCAAAGGACATAACTGCCTACCACACAGTGTTTCTTTCAGCCATATTAGGAGGAACAATAGTCATTGTCATTGGATTTTTTGCTGTACTTCTTTGTTATTGCAGGGATAAGTGCGGTACTCCGCAGAAAAGAGAAAGAAATATCACTAAACTTGAGGTCCTCAAGAGAGACCAGACAACTTCAACAACTCACATAAATCACATCAGCTCAGTCAAAGTTGCATTAAAAACCGAGGACAAGTCACAGTTATTCAGTGCCAAAAGCTCCTCGTACAACCCTCAGAAAAAGGAACCATCAAAGGTAGAAGCAGAAGAAAGAGTTTCCATGGTAAAAACTCGGGACGGTTTAAAAATCTACAATGAAGATGTTTCATTTCTGTCAGTCAATCAAAATCATTACTCAAGAAACCCAGCTCAGTCTTTGGAGCCCAATGTAGGGTCCAAACAACCTAAACATATTAACAACAATATATCTTCATCTCTAGGTGATGCTCAAGAGGAAAAGAGGTATCTCACAGGTAATGAAGATGTGTATGGGCATTCTCACATTCCAGAACAGCTTATGCACATCTACAGCCAGCCCATTGCCATCCTTCAAACATCTGACCTCTTCTCCACTCCAGAGCAGTTACATACTGCTAAGTCAGCTACTTTGCCAAGAAAGGGACAGTTAGTCTATGGCCAATTGATGGAACCAGTAAATAGAGAGAACTTTACACAGACATTGCCCAAAATGCCAATGCATTCTCATGTACAGCCTCCAGATRCCAGGGAAGAGAATATCCCACTCGAAGGTCAACAGAGCTTGCCATCCCAAACTTCAGATTGGAGCCGGTATTCAAACAGCCTACTAGAATCTGTTTCTGTTCCTGGAACACTAAATGAAGCTGTTGTAATGACTCCCTTTTCATCAGAGCTTCAAGGAATTTCAGAACAGACCCTCCTAGAACTGTCCAAAGGAAAGCCCTCCCCCCATCCCAGAGCCTGGTTTGTGTCTCTTGATGGAAAGCCAGTCGCACAAGTGAGGCACTCCTTCATAGACCTGAAAAAGGGCAAGAGAGCCCAGAGCAACGACACGAGTCTGGACTCTGGGGTAGACATGAATGAGCACCACTCAAGTAGAAAACTGGAGAGGGAAAAAACGTTCATCAAAAGTATGCATCAGCCTAAGATCCTTTACTTAGAAGATTTAGACCTGAGCAGTAGTGAGAGTGGAACCACTGTCTGCTCCCCCGAGGACCCAGCTTTAAGGCACTTCCTAGATGGAGGGAGTGGAGCTATCATGGAGCACCCTGGGGAAGAGTCCCCAGGAAGAAAAAGCACCGTTGAAGATTTTGAAGCCAATATATCCCCCACTAAGAAAAGGGGAAGACCACCACTAGTCAAAAAAGATAGCAAGACTAACATCTGGAAGAAGCGAGAGGAACGCCCACTGATTCCCATCAATTAA

Related Sequences

bmy_08717T0 Protein

Length: 834 aa      View alignments
>bmy_08717T0
MARLSRRVPCTLLLGLAAVLLKARLVPAAARAELSRSDLSLIQQQQQQQQQRQREEAEEERPEVPGASSTVTAPGYNVLRFSFSLPVSVFMLKVQVNDIISRQYLSQAVVEVFVNYTKTNSTVTRNNGAVLIRVPYKLGLSLTIIAYKDGYVLTPLPWKTGRMPIYSSVTLSLFPQSQANIWLFEDTVLITGKLADAKSQPSVQFSKALIRLPNSHHISNVTGYLTVLQQFLKVDNFLYTSGITLNKSGFEGNELTPLAAICVKIYSGGKELKVDGSIQISLPLLRTNGXSAGDHIPAWTFDMNTGAWVNHGRGMVKEYNNHLIWTYEAPHLGYWIAAPLPGTRGSGINGDSKDITAYHTVFLSAILGGTIVIVIGFFAVLLCYCRDKCGTPQKRERNITKLEVLKRDQTTSTTHINHISSVKVALKTEDKSQLFSAKSSSYNPQKKEPSKVEAEERVSMVKTRDGLKIYNEDVSFLSVNQNHYSRNPAQSLEPNVGSKQPKHINNNISSSLGDAQEEKRYLTGNEDVYGHSHIPEQLMHIYSQPIAILQTSDLFSTPEQLHTAKSATLPRKGQLVYGQLMEPVNRENFTQTLPKMPMHSHVQPPDXREENIPLEGQQSLPSQTSDWSRYSNSLLESVSVPGTLNEAVVMTPFSSELQGISEQTLLELSKGKPSPHPRAWFVSLDGKPVAQVRHSFIDLKKGKRAQSNDTSLDSGVDMNEHHSSRKLEREKTFIKSMHQPKILYLEDLDLSSSESGTTVCSPEDPALRHFLDGGSGAIMEHPGEESPGRKSTVEDFEANISPTKKRGRPPLVKKDSKTNIWKKREERPLIPIN*