Sequence details bmy_08718 (Coding sequence)

Part of scaffold_398 (Scaffold)

For more information consult the page for scaffold_398 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ITGAV ENSTTRG00000012455 (Bottlenosed dolphin)

Gene Details

integrin, alpha V

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011836, Bottlenosed dolphin)

Protein Percentage 99.24%
cDNA percentage 98.99%
Ka/Ks Ratio 0.13562 (Ka = 0.0036, Ks = 0.0265)

ITGAV ENSBTAG00000019929 (Cow)

Gene Details

integrin alpha-V precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026553, Cow)

Protein Percentage 98.33%
cDNA percentage 95.66%
Ka/Ks Ratio 0.04768 (Ka = 0.0077, Ks = 0.1623)

ITGAV  (Minke Whale)

Gene Details

integrin, alpha V

External Links

Gene match (Identifier: BACU019948, Minke Whale)

Protein Percentage 99.46%
cDNA percentage 99.35%
Ka/Ks Ratio 0.18474 (Ka = 0.0027, Ks = 0.0144)

Additional orthologs identified in other species via the OPTIC pipeline.

ITGAV (Human)  

Genome Location

Sequence Coding sequence

Length: 2964 bp    Location:827698..752244   Strand:-
Raw sequence 
>bmy_08718
ATGTTTCTTCTGGTGGGAGCTCCCAAAGCAAACACTACCCAGCCTGGGATCGTGGAAGGAGGGCAAGTCCTCAAGTGTGACTGGTCTTCTCACCGTGGGTGCCAGCCAATTGAATTTGATGCAACAGTTCTAAAATATATTCATTCTGGGAATTATAATACCAGTGAAGCAGAAATCATGATGTGGACTGTTACATTTGATATCATGACCAGCAATAGAGATTATGCCAAGGATGATCCGTTGGAGTTTAAGTCCCATCAGTGGTTTGGAGCATCTGTGAGGTCAAAACAGGATAAAATTTTGGCCTGTGCCCCACTGTACCACTGGAGGACTGAAATGAAACAGGAGAGAGAGCCTGTTGGAACATGCTTTCTTCAGGATGGTACAAAGACTGTTGAGTACGCTCCATGCAGATCAAAAAATATTGATGCTGATGGACAGGGATTTTGTCAAGGAGGATTCAGCATTGATTTTACTAAAGCTGACAGAGTACTTCTTGGTGGTCCTGGTAGCTTTTATTGGCAAGGTCAGCTCATTTCAGATCAAGTAGCAGAAATTGTATCTAAATATGACCCCAAAGTTTATAGCATCAAGTATAATAACCAGTTAGCAACTCGGACCGCACAAGCTATTTTTGATGACAGTTATTTGGGTTACTCAGTGGCCGTCGGAGATTTCAACGGTGATGGCATAGATGACTTTGTTTCAGGAGTTCCAAGAGCAGCAAGGACTTTGGGAATGGTTTATATTTATGATGGGAAAAATATGTCCTCCTTACACAATTTTACTGGTGAACAGATGGCTGCATATTTTGGATTTTCTGTCGCTGCCACTGACATTAATGGGGATGATTACGCAGACGTATTTATTGGAGCGCCTCTCTTCATGGATCGTGGTTCTGATGGCAAACTCCAGGAGGTGGGGCAGGTCTCAGTGTCTCTGCAAAGAGCTTCGGGAGACTTCCAGACAACCAAACTGAATGGGTTTGAGGTCTTTGCAAGGTTCGGCAGTGCCATAGCCCCTTTGGGAGATCTGGACCAGGACGGCTTCAATGATATTGCAATTGCTGCTCCATATGGGGGTGAAGATAAAAAAGGAATTGTTTATATTTTCAATGGAAGACCCACAGGCTTGAATGCGGTACCATCTCAGATCCTTGAAGGGAAGTGGGCTGCTCGGAGCATGCCACCAAGCTTCGGCTATTCAATGAAAGGAGCCACGGATATAGACAAGAATGGATATCCAGACTTAATTGTAGGAGCTTTTGGTGTAGATAGAGCTGTATTATACAGGGCCAGACCAGTTATCACTGTAAACGCTGGCCTTGAAGTGTATCCTAGCATTTTAAATCAAGACAATAAAACCTGCCCACTGCCTGGGACAGATCTCAAAGTTTCCTGTTTTAATGTCAGGTTCTGCTTAAAGGCAAATGGCAAAGGAGCACTTCCCACGAAACTTAACTTCCAGGTGGAGCTTCTTTTGGATAAACTCAAGCAAAAAGGAGCAATTCGACGAGCACTGTTTCTCCATAACAGGTCCCCGGGTCACTCCAAGAACATGACCATCTCAAGGGGGGGACAGATGCAATGTGAAGAACTAATAGCATATCTGCGGGATGAATCTGAATTTAGAGAYAAACTCACTCCTATTACTATTTTTATGGAGTATCGGTTGGATTATAGAACAGCTGCTGATGCGACAGGCTTGCAGCCTATTCTTAACCAATTCACTCCTGCCAATATTAGTCGACAGAAGATCTATATTGGGGACGACAACCCTCTGACCTTGATTGTTAAGGCTCAGAATCAGGGGGAAGGTGCCTATGAAGCTGAGCTCATCGTTTCCATCCCACCGCAGGCCGATTTCATCGGGGTGGTCCGCAACAGTGAAGCTTTAGCAAGACTTTCCTGTGCCTTTAAGACAGAAAACCAAACCCGCCAGGTGGTATGTGACCTTGGAAACCCAATGAAGGCTGGAACTCAACTCCTAGCTGGTCTTCGTTTCAGTGTGCACCAGCAATCAGAGATGGATACTTCCGTGAAATTTGACTTACAAATCCAAAGCTCCAATCTTTTTGACAAAGTAAGCCCGGTTGTATCTTACAAAGTTGACCTTGCTGTTTTAGCTGCTGTTGAGATAAGAGGAGTCTCAAGTCCTGATCATATCTTTCTTCCGATTCCAAATTGGGAGCACAAGGAAAACCCTGAGACTGAAGAAGACGTTGGGCCAGTTGTTCAGCACATCTACGAGCTGAGAAATAACGGTCCGAGTTCATTCAGCAAGGCAATGCTAAATCTTCAGTGGCCTTACAAATATAACAATAACACTTTGTTGTACATCCTTCAATATGATATTGATGGGCCAATGAACTGCACTTCAGATATGGAGATCAACCCTTTGAGAATTAAGATCTCAAATTCGCAAACAACTGAAAAGAATGACACAGTTGGTGGGCAAGGTGACCGGAACCATCTCATCACTAAGCGGGATCTCACCCTCAGTGAAGGAGATGTGCACACTTTGGGTTGTGGAATTGCTGAATGCTTGAAGATTGTCTGCCAGGTGGGGCGACTAGACAGAGGAAAGAGTGCAATCCTGTATGTAAAGTCTCTACTGTGGACTGAGACCTTTATGAATAAGGAAAACCAGAATCATTCATATTCTCTGAAGTCATCTGCTTCATTTAATGTCATAGAGTTTCCTTATAAGAACCTTCCAATTGAGGACATCTTCAACTCCACATTGGTTACCACTAATGTCACCTGGGGCATTCAGCCAGCACCCATGCCTGTACCTGTGTGGGTGATCATTTTAGCAGTTCTTGCAGGATTGTTGTTACTGGCTGTTTTGGTATTTGTAATGTACAGGATGGGCTTCTTTAAACGTGTCCGGCCACCTCAAGAAGAACAAGAAAGGGAACAGCTTCAACCTCATGAAAATGGTGAAGGAAACTCAGAAACTTAA

Related Sequences

bmy_08718T0 Protein

Length: 988 aa      View alignments
>bmy_08718T0
MFLLVGAPKANTTQPGIVEGGQVLKCDWSSHRGCQPIEFDATVLKYIHSGNYNTSEAEIMMWTVTFDIMTSNRDYAKDDPLEFKSHQWFGASVRSKQDKILACAPLYHWRTEMKQEREPVGTCFLQDGTKTVEYAPCRSKNIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPKVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLHNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRPTGLNAVPSQILEGKWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAVLYRARPVITVNAGLEVYPSILNQDNKTCPLPGTDLKVSCFNVRFCLKANGKGALPTKLNFQVELLLDKLKQKGAIRRALFLHNRSPGHSKNMTISRGGQMQCEELIAYLRDESEFRDKLTPITIFMEYRLDYRTAADATGLQPILNQFTPANISRQKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPPQADFIGVVRNSEALARLSCAFKTENQTRQVVCDLGNPMKAGTQLLAGLRFSVHQQSEMDTSVKFDLQIQSSNLFDKVSPVVSYKVDLAVLAAVEIRGVSSPDHIFLPIPNWEHKENPETEEDVGPVVQHIYELRNNGPSSFSKAMLNLQWPYKYNNNTLLYILQYDIDGPMNCTSDMEINPLRIKISNSQTTEKNDTVGGQGDRNHLITKRDLTLSEGDVHTLGCGIAECLKIVCQVGRLDRGKSAILYVKSLLWTETFMNKENQNHSYSLKSSASFNVIEFPYKNLPIEDIFNSTLVTTNVTWGIQPAPMPVPVWVIILAVLAGLLLLAVLVFVMYRMGFFKRVRPPQEEQEREQLQPHENGEGNSET*