Part of scaffold_399 (SequenceType object (1))

For more information consult the page for scaffold_399 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000007398 (Bottlenosed dolphin)

Gene Details

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006999, Bottlenosed dolphin)

Protein Percentage 91.09%
cDNA percentage 92.08%
Ka/Ks Ratio 0.20426 (Ka = 0.0548, Ks = 0.2684)

MGC142792ENSBTAG00000010971 (Cow)

Gene Details

LIM and senescent cell antigen-like-containing domain protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000014566, Cow)

Protein Percentage 90.1%
cDNA percentage 85.97%
Ka/Ks Ratio 0.07048 (Ka = 0.0593, Ks = 0.8413)

LIMS1 (Minke Whale)

Gene Details

LIM and senescent cell antigen-like domains 1

External Links

Gene match (Identifier: BACU012336, Minke Whale)

Protein Percentage 91.09%
cDNA percentage 92.9%
Ka/Ks Ratio 0.2804 (Ka = 0.0552, Ks = 0.197)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 609 bp    Location:137854..118500   Strand:-
>bmy_08724
ATGCTCTTTGCTCCGTGCTGTCACCAGTGTGGGGAATTCATCATCGGCCGAGTGATCAAAGCCATGAACAACAGCTGGCACCCCGAGTGTTTCCGCTGTGACCTCTGCCAGGGGGTCCTGGCAGACATCGGGTTTGTCAAGAGCGCCGGGAGACATCTGTGTCGCCCCTGCCATAACCGAGAGAAAGCCCGAGGCCTTGGGAAATACATCTGCCAGAAGTGTCATGCCATCATTGACGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCACTTCAACTGTGCCAACTGCGGGAAGGAGCTGACCGCCGACGCCCGGGAGCTGAAGGGGGAGCTGTACTGCTTGCCGTGCCACGACAAGATGGGGGTCCCCATCTGTGGCGCCTGCCGCCGGCCCATCGAAGGGCGCGTGGTGAACGCCATGGGCAAGCAGTGGCACGTGGAGCATTTTGTTTGTGCCAAGTGTGAGAAACCGTTTCTCGGACATCGCCATTACGAGAGGAAGGGCCTGGCGTACTGTGAAACCCACTACAACCAGGTAGTGATGGGGCTCGTGGAATACTACACACACACGTATGAACTTGAGCTTCTCAATGCTTAA

Related Sequences

bmy_08724T0 SequenceType object (3)

Length: 203 aa      View alignments
>bmy_08724T0
MLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQGVLADIGFVKSAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQVVMGLVEYYTHTYELELLNA*