Part of scaffold_397 (Scaffold)

For more information consult the page for scaffold_397 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM55A ENSTTRG00000003770 (Bottlenosed dolphin)

Gene Details

transmembrane protein 55A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003539, Bottlenosed dolphin)

Protein Percentage 55.39%
cDNA percentage 61.93%
Ka/Ks Ratio 0.79475 (Ka = 0.2934, Ks = 0.3692)

TMEM55A ENSBTAG00000039968 (Cow)

Gene Details

Transmembrane protein 55A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028656, Cow)

Protein Percentage 71.57%
cDNA percentage 76.63%
Ka/Ks Ratio 0.54114 (Ka = 0.2392, Ks = 0.4421)

TMEM55A  (Minke Whale)

Gene Details

transmembrane protein 55A

External Links

Gene match (Identifier: BACU006977, Minke Whale)

Protein Percentage 71.08%
cDNA percentage 79.25%
Ka/Ks Ratio 0.96942 (Ka = 0.2461, Ks = 0.2538)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 615 bp    Location:1261367..1269155   Strand:+
>bmy_08749
ATGCTTGCCTCTGCTCTCCGCATCCCATTCGAGAAATGTCACTCCCATGTCCCCACCATACTTACAAGAAAGCAGCCCCAGAGCAGAACCCCACCTCCGTACACAGCCATCACCAGTCCAGATGCCAGTGGTATTCCAGTAATAAACTGCCATGTGTGCCAATCTCTCAATTTGGATGGCAAGCTTCACCAGCATGTGGCTAAGTGCACGGTTTGCAATGATGCTACGCCAGTCAAAAATCCCCCAACAGGGAAGAAGTATGTTAGATGCCCTTGTAATTGTCTCCTCATTTATAAGGACACATCACGGCAAATAGGATGTCCAAGACCCACCTGTAGACACATAATTAACCTTGGCCCAGTAATGCTTATTTCTGAAGAACAGCCAGCTCAACCTGCATTGCCAGTCCAACCAGAAGGTACAAGGATCATGTGTGGGCACTGTGGAAACATGTTCTTGTGGACGGAACTGAGGTTCAACACTCTGGCAAAATGCCCACACTGCAGAAAAATTTCCTCAGTGGGTAGTGCACTTCCTCGAAGCATTTTAAAGAATCATTCTGCTCATTTTGATGAAAAGAGAATATTTTTCCAGCAGTGGTCTATAAACTACTAA

Related Sequences

bmy_08749T0 Protein

Length: 205 aa      View alignments
>bmy_08749T0
MLASALRIPFEKCHSHVPTILTRKQPQSRTPPPYTAITSPDASGIPVINCHVCQSLNLDGKLHQHVAKCTVCNDATPVKNPPTGKKYVRCPCNCLLIYKDTSRQIGCPRPTCRHIINLGPVMLISEEQPAQPALPVQPEGTRIMCGHCGNMFLWTELRFNTLAKCPHCRKISSVGSALPRSILKNHSAHFDEKRIFFQQWSINY*