Part of scaffold_407 (Scaffold)

For more information consult the page for scaffold_407 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RBPJL ENSTTRG00000013806 (Bottlenosed dolphin)

Gene Details

recombination signal binding protein for immunoglobulin kappa J region-like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013095, Bottlenosed dolphin)

Protein Percentage 62.6%
cDNA percentage 68.32%
Ka/Ks Ratio 0.36236 (Ka = 0.2966, Ks = 0.8186)

RBPJL ENSBTAG00000011283 (Cow)

Gene Details

recombining binding protein suppressor of hairless-like protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014992, Cow)

Protein Percentage 63.08%
cDNA percentage 67.56%
Ka/Ks Ratio 0.21436 (Ka = 0.3044, Ks = 1.4199)

RBPJL  (Minke Whale)

Gene Details

recombination signal binding protein for immunoglobulin kappa J region-like

External Links

Gene match (Identifier: BACU015456, Minke Whale)

Protein Percentage 64.12%
cDNA percentage 70.99%
Ka/Ks Ratio 0.3893 (Ka = 0.3014, Ks = 0.7742)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 792 bp    Location:1171632..1176182   Strand:+
>bmy_08785
AACGGTCCCTTCCTCCCATTCATTGCATTCCACCTGCCCCCTTCGGGCGCTAYGCCACCTCGCCCCTTGACGCTCCCTGCTGCGGGCGGCCGGCCTGTCCCCACTCCCAGGTCATCCCCAGAGCCCGCCGCGGTCCTGAGGGAAGGTGTGCGCCAGTGCCTACAGCAACAGTGCGAGCAGACGGTGCGGATCCTGCACGCCAAGGTGGCCCAGAAATCATACGGAAATGAGAAGCGAACCTGGAGAGGACTCAGGGCTCAGCTATTGGCCAATCAGGGGCCTTTTCCTTCAGCCACCATCAGCCCTGACTTTGCCCACCAGGCAGGGGAGACCGGGCCCGTCGTCTGCGGTTACATGGGACTGGACGGCGCGTCCGGCAGCGGCGCCGAGACGCAGAAGCTGAATTTCGAAGAGCAGCCGGACTCCAGGGAATTCGGTTGCGCCAAGACCCTGTACATCTCGGACGCAGACAAGAGGAAGCACTTCCGGCTGGTGCTGCGGCTAGTGCTCCGAGGGGGGCGGGAGCTGGGCACTTTCCACAGCCGCCTCATCAAGGTCATCTCCAAGCCCTCGCAGAAGAAGCAGTCGCTGAAAAACACCGACCCCAGACTGGCTCAGGGGACAGAGGATGGGAACTTACCTGGCAAGTCCAAGGGACCAAGCCAGGCAGGGGCACTGATTCCACCTCCCCTCACAGTGTGCATATCCTCGGGCTCAAAGGTCTCCCTCTTCAACCGCCTGCGCTCCCAGACGGTCTCCACGCGCTACCTCTCTGTGGAGGATGGGGACTTC

Related Sequences

bmy_08785T0 Protein

Length: 264 aa      View alignments
>bmy_08785T0
NGPFLPFIAFHLPPSGAXPPRPLTLPAAGGRPVPTPRSSPEPAAVLREGVRQCLQQQCEQTVRILHAKVAQKSYGNEKRTWRGLRAQLLANQGPFPSATISPDFAHQAGETGPVVCGYMGLDGASGSGAETQKLNFEEQPDSREFGCAKTLYISDADKRKHFRLVLRLVLRGGRELGTFHSRLIKVISKPSQKKQSLKNTDPRLAQGTEDGNLPGKSKGPSQAGALIPPPLTVCISSGSKVSLFNRLRSQTVSTRYLSVEDGDF