Sequence detailsbmy_08786 (Coding sequence)

Part of scaffold_407 (SequenceType object (1))

For more information consult the page for scaffold_407 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SDC4ENSBTAG00000015127 (Cow)

Gene Details

Syndecan

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020125, Cow)

Protein Percentage 89.77%
cDNA percentage 89.77%
Ka/Ks Ratio 0.15328 (Ka = 0.0487, Ks = 0.3176)

Additional orthologs identified in other species via the OPTIC pipeline.

SDC4 (Human)   Sdc4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 537 bp    Location:1193680..1187055   Strand:-
Raw sequence 
>bmy_08786
ATCCGAGAAACTGAGGTCATCGACCCCCGAGACCTCCTAGAAGGCCGACACTTTTCCGGAGATTTACCGGACGACGAGGATGTTGGGGTACCTGAGCAGGAGCCCCATGACTTTGAGCTGTCTGGCTCTGGAGATCTGGATGACTCGGAGGGCACCCTGATCTTCCCGGAAGTGATCCATCCCTTGGTGCCTCTAGATAACCACATCCCTGAGAAGACAGGGCTTGGGAGCCRGGTCCCCACTGAACCCAAGGAACTGGAGGAGAATGAGGTCATCCCCAAGAGGATGTCACCCTTTGATGGGGACGAGGATGTGTCCAACAAGGTGTCCATGTCCAGCACAGCCCAGGGCAGCAACATCTTTGAGAGGACAGAGGTTCTGGCAGCTCTGATTGTGGGCGGTGGCGTGGGCATCCTCTTTGCCATTTTCCTGGTCCTGCTGCTGGTGTACCGCATGAAGAAGAAGGATGAGGGCAGCTACGACCTGGGCAAGAAACCTATCTACAAAAAAGCCCCCACCAACGAGTTCTACGCCTGA

Related Sequences

bmy_08786T0 SequenceType object (3)

Length: 179 aa      
>bmy_08786T0
IRETEVIDPRDLLEGRHFSGDLPDDEDVGVPEQEPHDFELSGSGDLDDSEGTLIFPEVIHPLVPLDNHIPEKTGLGSXVPTEPKELEENEVIPKRMSPFDGDEDVSNKVSMSSTAQGSNIFERTEVLAALIVGGGVGILFAIFLVLLLVYRMKKKDEGSYDLGKKPIYKKAPTNEFYA*