Part of scaffold_407 (Scaffold)

For more information consult the page for scaffold_407 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TP53TG5 ENSTTRG00000013811 (Bottlenosed dolphin)

Gene Details

TP53 target 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013099, Bottlenosed dolphin)

Protein Percentage 37.3%
cDNA percentage 42.9%
Ka/Ks Ratio 1.01506 (Ka = 0.2785, Ks = 0.2744)

TP53TG5 ENSBTAG00000005184 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006831, Cow)

Protein Percentage 64.44%
cDNA percentage 75.87%
Ka/Ks Ratio 0.55416 (Ka = 0.2622, Ks = 0.4732)

TP53TG5  (Minke Whale)

Gene Details

TP53 target 5

External Links

Gene match (Identifier: BACU015453, Minke Whale)

Protein Percentage 94.19%
cDNA percentage 97.67%
Ka/Ks Ratio 3.06459 (Ka = 0.0281, Ks = 0.0092)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 738 bp    Location:1235800..1229286   Strand:-
>bmy_08788
ATGGCGGAGGCGCCGGGCCAGCCCCTGGAGCTCAATCAAGCCCCGTTGCCTCGGTTGCTGGAACGCTCCCAGGATGCTCTGACCCTCAGGACAAACTCCAAGCCCCTCAGCGTGCTAAAAAACTTGTCGCTCTTGAAGCTGCTCAAGAGCTCGAACCCTCGGACCCAAGAGCTGCATAACCTGGCCAGAAGGTGTTGGAATTCACTGCTCAGAGTTCCGAAGATGCTCGGGGTCTCCTCCGGGTACGACGACGTCTGGGATAATGTAGAACAAAATAACAAAGATCTTCAGGAGGCTGGGTGTCCCAACAAGAAACTGGACTCCAAGAAATCAGAGCCCCTAAGGGAGTCTGAGGAGTCAAGGCCCAAGGCGGCACTGGGGGAGAGGCACACGGCACAGAAAGCAGTGCCACAGAGGGAGGGGCAGATGGAGCCTGAGGTCCCCGTGACATCAAAGGGTCATGGCCTGCCCACTGACCCTGGAGCCCAGGAGGGGCAATCACCCACTGGGGACCCCCGAGTCGTCTTCCTGAAGACCCGCCAGTACAGAACTCCCATGAAGGACATGAAGCAGCTGGAAACAGCAGACCAGTGGATCTGGTTTGAGGGGCTGCCCACACGAGTCCACCTCCCAGGGCCCCGGGTGATGTGCAGATCATCCGCCCTGCGCAGGGTCAAGCGCTGCTGCACCCGCCTCTGCTCGGCATCACTTGAGCTGCCAATGGGCCGTCCATACAAG

Related Sequences

bmy_08788T0 Protein

Length: 246 aa      View alignments
>bmy_08788T0
MAEAPGQPLELNQAPLPRLLERSQDALTLRTNSKPLSVLKNLSLLKLLKSSNPRTQELHNLARRCWNSLLRVPKMLGVSSGYDDVWDNVEQNNKDLQEAGCPNKKLDSKKSEPLRESEESRPKAALGERHTAQKAVPQREGQMEPEVPVTSKGHGLPTDPGAQEGQSPTGDPRVVFLKTRQYRTPMKDMKQLETADQWIWFEGLPTRVHLPGPRVMCRSSALRRVKRCCTRLCSASLELPMGRPYK