Part of scaffold_407 (Scaffold)

For more information consult the page for scaffold_407 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PIGT ENSTTRG00000013813 (Bottlenosed dolphin)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class T

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013101, Bottlenosed dolphin)

Protein Percentage 97.97%
cDNA percentage 97.63%
Ka/Ks Ratio 0.09203 (Ka = 0.0086, Ks = 0.0938)

PIGT ENSBTAG00000016122 (Cow)

Gene Details

GPI transamidase component PIG-T precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021457, Cow)

Protein Percentage 93.29%
cDNA percentage 92.34%
Ka/Ks Ratio 0.08922 (Ka = 0.0301, Ks = 0.3375)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1734 bp    Location:1260548..1273122   Strand:+
>bmy_08790
CCTTCAAAGGCCTATCCTGGCAGTCGCTGTGGTAACCGCACCCCGGCTTCCGGGACGGCACCGGAAGTCGCTTCTCAGACGCTCTTCCTATTGGAGGCCGGCCTTCCGCGGAGGCGGGGCCATTGGGAGGCGGAAACAGCCGCAGGTATGGCGGCGGCAGCGCCGCTTTGTCTGCTGGTGCTGCTGCTTCTCGGGCCGGGCGTCTGGGGCCAGACAGAGCCCCCACGCGACAGCCTGCGGGAGGAGCTCGTCATCTCCCCGCTGCCTTCTGGGGATGTAGCCGCCACATTCCAGTTCCGCACGCGCTGGGATTCGGAGCTGCAGCGGGAAGAAGTATCTCATTATAGGCTCTTCCCCAAAGCACTGGGGCAGTTGATCTCCAAGTATTCTCTACGGGAGCTGCACCTGTCGTTAACCCAAGGCTTCTGGAGGACTCGATACTGGGGGACACCCTTCTTGCAGGCCCCATCAGGTGCAGAGCTGTGGGCCTGGTTCCAAGACACCGTCACTGACGTGGATAAGTCCTGGAAGGAGCTCAGTAACGTCCTCTCGGGGATCTTCTGCGCCTCTCTCAACTTCATCGACTCCACCAACACAGTCACGCCCAGCGCCTCCTTCAAACCCCTGGGGCTGGCCAATGGCCTCTCCGTGCTGCTGAAGGCCGATCGCCTGTTCCACACGAGCTACCACTCCCAGGCAGTGCATATCCGCCCTGATGCACGCTGTGCCAGCATCTCCTGGGAGCTGAGGCAGACCCTTTCCGTTGTATTTGATGCCTTCGTCACGGGGCAGGGGAAGCAAGGTAAGCTACCTTGGCAGCCCATCTCTGCCCACCCACTGCCAGCCCCACCCCATCTACGCGGAGCAGGCCTAGTCCCGCCCCTGCGCAACCCCTCTCTCTGCTCCTCAGACTGGTCCCTCTTCCGGATGTTCTCCCGAACCCTCACAGAGCCCTGCCCCCTGGCTTCGGAGAGCCGAGTCTATGTGGATGTCACCAACTATAGCCAGGACAATGAGACATTGGAGGTGTACCCGCCCCCGCTCACCACGTACCAGGACGTCGTCCTGGGCACCCGGAAGACCTATGCCGTCTACGACCTGCTGGACACAGCCGCCCCACCCACGCCCTTCCTGTACGCCCAGCGGTACGTGAGCGGCTACGGGCTGCACAACGGGGAGCTGAGCACGCTGCTGTATAACACCCACCCGTACCGGGCCTTCCCCGTGCTGTTGCTGGACACCGTGCCCTGGTACCTGCGGCTGTACGTGCACACCCTCACCATCACCTCCAAGGGCAAGGAGAACAAACCAATCACCAAGGTCTCCATCCAGTTTGAGCGGGCGCTGCTTAAGTGGACTGAGTACACCCCAGACCCAAACCACGGCTTCTATGTCAGCCCATCTGTCCTCAGTGCCCTCGTGCCCAGCGAGGTGGCCACCCAACCTGTGGACTGGGAAGAGAGTCCCCTCTTCAACACCCTCTTCCCAGTCTCCGACAGCTCCAGCTACTTCGTGCGGCTCTACACGGAGCCACTGCTGGTGAACCTGCCCACGCCGGACTTCAGCATGCCCTACAACGTCATCTGCCTCACGTGCACGGTGGTGGCCGTGTGCTACGGCTCCTTCTACAACCTCCTCACCCGAACCTTCCAGATTGAGGAGCCCAGCAAGGGCGGCCTGGCCAAGCGGCTGGCCAACCTCATCCGGCGCGCCCGCGGCGTCCCCCCGCTCTGA

Related Sequences

bmy_08790T0 Protein

Length: 578 aa      View alignments
>bmy_08790T0
PSKAYPGSRCGNRTPASGTAPEVASQTLFLLEAGLPRRRGHWEAETAAGMAAAAPLCLLVLLLLGPGVWGQTEPPRDSLREELVISPLPSGDVAATFQFRTRWDSELQREEVSHYRLFPKALGQLISKYSLRELHLSLTQGFWRTRYWGTPFLQAPSGAELWAWFQDTVTDVDKSWKELSNVLSGIFCASLNFIDSTNTVTPSASFKPLGLANGLSVLLKADRLFHTSYHSQAVHIRPDARCASISWELRQTLSVVFDAFVTGQGKQGKLPWQPISAHPLPAPPHLRGAGLVPPLRNPSLCSSDWSLFRMFSRTLTEPCPLASESRVYVDVTNYSQDNETLEVYPPPLTTYQDVVLGTRKTYAVYDLLDTAAPPTPFLYAQRYVSGYGLHNGELSTLLYNTHPYRAFPVLLLDTVPWYLRLYVHTLTITSKGKENKPITKVSIQFERALLKWTEYTPDPNHGFYVSPSVLSALVPSEVATQPVDWEESPLFNTLFPVSDSSSYFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFQIEEPSKGGLAKRLANLIRRARGVPPL*