Sequence detailsbmy_08790 (Coding sequence)

Part of scaffold_407 (SequenceType object (1))

For more information consult the page for scaffold_407 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PIGTENSTTRG00000013813 (Bottlenosed dolphin)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class T

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013101, Bottlenosed dolphin)

Protein Percentage 97.97%
cDNA percentage 97.63%
Ka/Ks Ratio 0.09203 (Ka = 0.0086, Ks = 0.0938)

PIGTENSBTAG00000016122 (Cow)

Gene Details

GPI transamidase component PIG-T precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021457, Cow)

Protein Percentage 93.29%
cDNA percentage 92.34%
Ka/Ks Ratio 0.08922 (Ka = 0.0301, Ks = 0.3375)

Additional orthologs identified in other species via the OPTIC pipeline.

PIGT (Human)   Pigt (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1734 bp    Location:1260548..1273122   Strand:+
Raw sequence 
>bmy_08790
CCTTCAAAGGCCTATCCTGGCAGTCGCTGTGGTAACCGCACCCCGGCTTCCGGGACGGCACCGGAAGTCGCTTCTCAGACGCTCTTCCTATTGGAGGCCGGCCTTCCGCGGAGGCGGGGCCATTGGGAGGCGGAAACAGCCGCAGGTATGGCGGCGGCAGCGCCGCTTTGTCTGCTGGTGCTGCTGCTTCTCGGGCCGGGCGTCTGGGGCCAGACAGAGCCCCCACGCGACAGCCTGCGGGAGGAGCTCGTCATCTCCCCGCTGCCTTCTGGGGATGTAGCCGCCACATTCCAGTTCCGCACGCGCTGGGATTCGGAGCTGCAGCGGGAAGAAGTATCTCATTATAGGCTCTTCCCCAAAGCACTGGGGCAGTTGATCTCCAAGTATTCTCTACGGGAGCTGCACCTGTCGTTAACCCAAGGCTTCTGGAGGACTCGATACTGGGGGACACCCTTCTTGCAGGCCCCATCAGGTGCAGAGCTGTGGGCCTGGTTCCAAGACACCGTCACTGACGTGGATAAGTCCTGGAAGGAGCTCAGTAACGTCCTCTCGGGGATCTTCTGCGCCTCTCTCAACTTCATCGACTCCACCAACACAGTCACGCCCAGCGCCTCCTTCAAACCCCTGGGGCTGGCCAATGGCCTCTCCGTGCTGCTGAAGGCCGATCGCCTGTTCCACACGAGCTACCACTCCCAGGCAGTGCATATCCGCCCTGATGCACGCTGTGCCAGCATCTCCTGGGAGCTGAGGCAGACCCTTTCCGTTGTATTTGATGCCTTCGTCACGGGGCAGGGGAAGCAAGGTAAGCTACCTTGGCAGCCCATCTCTGCCCACCCACTGCCAGCCCCACCCCATCTACGCGGAGCAGGCCTAGTCCCGCCCCTGCGCAACCCCTCTCTCTGCTCCTCAGACTGGTCCCTCTTCCGGATGTTCTCCCGAACCCTCACAGAGCCCTGCCCCCTGGCTTCGGAGAGCCGAGTCTATGTGGATGTCACCAACTATAGCCAGGACAATGAGACATTGGAGGTGTACCCGCCCCCGCTCACCACGTACCAGGACGTCGTCCTGGGCACCCGGAAGACCTATGCCGTCTACGACCTGCTGGACACAGCCGCCCCACCCACGCCCTTCCTGTACGCCCAGCGGTACGTGAGCGGCTACGGGCTGCACAACGGGGAGCTGAGCACGCTGCTGTATAACACCCACCCGTACCGGGCCTTCCCCGTGCTGTTGCTGGACACCGTGCCCTGGTACCTGCGGCTGTACGTGCACACCCTCACCATCACCTCCAAGGGCAAGGAGAACAAACCAATCACCAAGGTCTCCATCCAGTTTGAGCGGGCGCTGCTTAAGTGGACTGAGTACACCCCAGACCCAAACCACGGCTTCTATGTCAGCCCATCTGTCCTCAGTGCCCTCGTGCCCAGCGAGGTGGCCACCCAACCTGTGGACTGGGAAGAGAGTCCCCTCTTCAACACCCTCTTCCCAGTCTCCGACAGCTCCAGCTACTTCGTGCGGCTCTACACGGAGCCACTGCTGGTGAACCTGCCCACGCCGGACTTCAGCATGCCCTACAACGTCATCTGCCTCACGTGCACGGTGGTGGCCGTGTGCTACGGCTCCTTCTACAACCTCCTCACCCGAACCTTCCAGATTGAGGAGCCCAGCAAGGGCGGCCTGGCCAAGCGGCTGGCCAACCTCATCCGGCGCGCCCGCGGCGTCCCCCCGCTCTGA

Related Sequences

bmy_08790T0 SequenceType object (3)

Length: 578 aa      View alignments
>bmy_08790T0
PSKAYPGSRCGNRTPASGTAPEVASQTLFLLEAGLPRRRGHWEAETAAGMAAAAPLCLLVLLLLGPGVWGQTEPPRDSLREELVISPLPSGDVAATFQFRTRWDSELQREEVSHYRLFPKALGQLISKYSLRELHLSLTQGFWRTRYWGTPFLQAPSGAELWAWFQDTVTDVDKSWKELSNVLSGIFCASLNFIDSTNTVTPSASFKPLGLANGLSVLLKADRLFHTSYHSQAVHIRPDARCASISWELRQTLSVVFDAFVTGQGKQGKLPWQPISAHPLPAPPHLRGAGLVPPLRNPSLCSSDWSLFRMFSRTLTEPCPLASESRVYVDVTNYSQDNETLEVYPPPLTTYQDVVLGTRKTYAVYDLLDTAAPPTPFLYAQRYVSGYGLHNGELSTLLYNTHPYRAFPVLLLDTVPWYLRLYVHTLTITSKGKENKPITKVSIQFERALLKWTEYTPDPNHGFYVSPSVLSALVPSEVATQPVDWEESPLFNTLFPVSDSSSYFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFQIEEPSKGGLAKRLANLIRRARGVPPL*