Part of scaffold_396 (Scaffold)

For more information consult the page for scaffold_396 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TNFRSF9 ENSTTRG00000015305 (Bottlenosed dolphin)

Gene Details

tumor necrosis factor receptor superfamily, member 9

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014501, Bottlenosed dolphin)

Protein Percentage 93.75%
cDNA percentage 93.45%
Ka/Ks Ratio 0.32231 (Ka = 0.0432, Ks = 0.1341)

BT.49346 ENSBTAG00000003313 (Cow)

Gene Details

tumor necrosis factor receptor superfamily member 9

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004288, Cow)

Protein Percentage 78.03%
cDNA percentage 85.2%
Ka/Ks Ratio 0.51089 (Ka = 0.1315, Ks = 0.2574)

TNFRSF9  (Minke Whale)

Gene Details

tumor necrosis factor receptor superfamily, member 9

External Links

Gene match (Identifier: BACU003017, Minke Whale)

Protein Percentage 95.54%
cDNA percentage 95.24%
Ka/Ks Ratio 0.39502 (Ka = 0.0344, Ks = 0.087)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 675 bp    Location:851169..874504   Strand:+
>bmy_08799
ATGGGAAATTGCTATTACAACATAGTGGCTACTGTGCTGTTGGTCATGAATTTCGAGAGGACAAGATCATTGCAGGATTTCTGTAGTAACTGTTCAGCAGGTACTTTCTGTGGGAAAAACAAGCATGAGCTTTGCACTCCTTGTCCTTCAAATAGTTTCTCCAGCACAAGTGGACAAAAGACCTGTGATGTRTGCAGAAAGTGTGAAGGTGTTTTCAGGACCAAGAAAGCATGTTCCTCCACCAGTAATGCGGAGTGTGAGTGTGTGTCGGGATTCTACTGCCTGGGGGAAGGATGTACCATGTGTGAAGAGGACTGTAAACAAGGTCAAGAATTAACAAAAGAGGGTTGTAAAGACTGTTCCTTTGGGACATTTAATGATCGGGAACATGGTGACTGTAAACCTTGGACAGACTGTTCTTTGGATGGGAAGTCTGTCCTTGTGAATGGGACGAAGGAAAGCGATGTGGTATGTGGACCAGCGTCAGCTGACTTCTCTCCAGGTGCATCTTCCACCGTCATGCCTGCCCCTGGGGGAGAGCCAGGTCACACCACCCGGATCATCATCTTCTTTCTTGCACTGACGTCGACTGCAGTGCTGTTCCTGGCGTCCTTCGTGGTGCTCCGTTTCTCTGTGATGAAGTACCTCCATTTGGCTCGCTCTTTACTGTTTTGA

Related Sequences

bmy_08799T0 Protein

Length: 225 aa      View alignments
>bmy_08799T0
MGNCYYNIVATVLLVMNFERTRSLQDFCSNCSAGTFCGKNKHELCTPCPSNSFSSTSGQKTCDVCRKCEGVFRTKKACSSTSNAECECVSGFYCLGEGCTMCEEDCKQGQELTKEGCKDCSFGTFNDREHGDCKPWTDCSLDGKSVLVNGTKESDVVCGPASADFSPGASSTVMPAPGGEPGHTTRIIIFFLALTSTAVLFLASFVVLRFSVMKYLHLARSLLF*