Part of scaffold_406 (Scaffold)

For more information consult the page for scaffold_406 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UTP6 ENSTTRG00000009911 (Bottlenosed dolphin)

Gene Details

UTP6, small subunit (SSU) processome component, homolog (yeast)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009400, Bottlenosed dolphin)

Protein Percentage 93.44%
cDNA percentage 95.39%
Ka/Ks Ratio 0.64499 (Ka = 0.0421, Ks = 0.0653)

UTP6 ENSBTAG00000015612 (Cow)

Gene Details

U3 small nucleolar RNA-associated protein 6 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020740, Cow)

Protein Percentage 73.76%
cDNA percentage 82.8%
Ka/Ks Ratio 0.52698 (Ka = 0.1678, Ks = 0.3184)

UTP6  (Minke Whale)

Gene Details

UTP6, small subunit (SSU) processome component, homolog (yeast)

External Links

Gene match (Identifier: BACU013927, Minke Whale)

Protein Percentage 76.61%
cDNA percentage 82.65%
Ka/Ks Ratio 0.74451 (Ka = 0.1891, Ks = 0.2539)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1695 bp    Location:350977..324323   Strand:-
>bmy_08839
ATGGCGGAGATAATTCAGGAACGCATAGAGGATCGACTCCCGGAATTGCAACAGCTGGAGCGCATTGGACTGTTCAGTCGTGCGGAGATTAAGGCTATCATTAAAAAGGCTTCAGATCTAGAATACAGAATACAGCGAAGAACTCTTTTTAAGGAAGACTTTATCAATTATGTTCAATATGAAATCAATCTTTTGGAACTGATCCAGCGAAGACGAGTTCGTATTGGGTATTCATTTAAGAAGGATGAGATTGAAAATTCTATTGTACACCGGGTGCAAGGTGTCTTCCGACGTGCGTCAGCCAAGTGGAAAGATGATGTTCAACTTTGGCTGTCTTATGTAGTCTTTTGTAAGAAGTGGGCTACCAAAGTTCAACTTAGCAAGGTATTCTCTGCCATGTTGGCCATTCATTCGAACAAGCCAGCCTTGTGGATTATGGCGGCCAAATGGGAAATGGAAGATCGCTTGTCTTCAGAAAGTGCAAGACAACTATTTCTTCGGGCTCTGCGCTTTCATCCAGAGTGCCCGAAACTTTATCAAGAGTATTTTAGGATGGAGCTGATGCATGCTGAGAAATTGAGGAAGGAAAAGCAAGAGTTTGAAAAAGCCAAGATGGATGTGGTGCAGAATTTCATGTGTCACTGCTTTCAATTGCACAGCTATTCGACTTTGCCAAAGATCTGCAAAGAGAAATTTATGATGAACGACCCCCTCACTTGGGATTATGTGGCCCGGCGAGAATTAGAGATCGAGTCACAGCCAGCAGAAGAGCCGCCCACAGCGAAACAAACCAAAGTGGCAGAGGTGGGCCGCCGGGAGGAGAGGTGCTGTGCTGTGTATGAAGAGGCGGTGAAGACTCTGCGTACAGAGGCCATGTGCAAGTGTTACATCAACTTTTGCATGGAAAGGTTTGCTAAGAAGACAAGCAGTCGGCTCCTCAGAGAGAAGAGGCTGGAAAGAACCATGGTTGCATTCAGGAAGGCACATGATCTCAGACTTCTACCAGAATTCCAGTACAAGCAGTGGAGCGAGTTGTTGCTGCGCCATGACTTCCTTACGGAAGCTCTGGAGGTGGCAGGAGCYGGGATGGAATTGTTCCCAGGCTCCGTGATGATGTGGCAGGKGAAGCTGCAGGTGCTGATTGCCTCAAAGAGCCCTGACGTAGCCATGCTTTTTGAAGAAGCCTTTGTGCACCTGAAACCCCAGATTTGTCTGCCATTGTGGATTTCTTGGGCAGAGTGGAGTGAAGGTGCCAAAAGCCAAGAAGACACTGAAGCAATCTTTAAGAAAGCTGTCTTAGCTGTCACGGGTGGCGACTCAGTCACTCTGAAGGATAAGTACCTGGATTGGGCTTATCGAAGTGGTGGCTACAAAAAGGCCAGAGCTGTGTTTAAAAGTTTACAAGAAAGCCGTCCATTTTCAGTTGATTTTTTCAGGAAGATGATCCAATTTGAAAAGGAGCAAGAATCCTGCAAGATAGCGAACTTAAGAGAATATTATGAGAGAGCTTTGAGAGAATTCGGATCTGTAGATTCTGATCTTTGGATGGATTACATCAAAGAAGAATTGAACCACCCCCTTGGTAGACCTGAGCACTGCGGACAGATCTACTGGCGAGCCATGAAAATGTTGCAGGGAGAGTCAGCAGAGCTGTTTGTAGCTAAACATGCTGTGCACCAGGCCGGCCAGTTGTGA

Related Sequences

bmy_08839T0 Protein

Length: 565 aa      View alignments
>bmy_08839T0
MAEIIQERIEDRLPELQQLERIGLFSRAEIKAIIKKASDLEYRIQRRTLFKEDFINYVQYEINLLELIQRRRVRIGYSFKKDEIENSIVHRVQGVFRRASAKWKDDVQLWLSYVVFCKKWATKVQLSKVFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFHPECPKLYQEYFRMELMHAEKLRKEKQEFEKAKMDVVQNFMCHCFQLHSYSTLPKICKEKFMMNDPLTWDYVARRELEIESQPAEEPPTAKQTKVAEVGRREERCCAVYEEAVKTLRTEAMCKCYINFCMERFAKKTSSRLLREKRLERTMVAFRKAHDLRLLPEFQYKQWSELLLRHDFLTEALEVAGAGMELFPGSVMMWQXKLQVLIASKSPDVAMLFEEAFVHLKPQICLPLWISWAEWSEGAKSQEDTEAIFKKAVLAVTGGDSVTLKDKYLDWAYRSGGYKKARAVFKSLQESRPFSVDFFRKMIQFEKEQESCKIANLREYYERALREFGSVDSDLWMDYIKEELNHPLGRPEHCGQIYWRAMKMLQGESAELFVAKHAVHQAGQL*