Part of scaffold_406 (Scaffold)

For more information consult the page for scaffold_406 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF135 ENSTTRG00000016426 (Bottlenosed dolphin)

Gene Details

ring finger protein 135

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015570, Bottlenosed dolphin)

Protein Percentage 12.34%
cDNA percentage 29.36%
Ka/Ks Ratio 0.16761 (Ka = 1.5658, Ks = 9.3424)

BT.65952 ENSBTAG00000017225 (Cow)

Gene Details

E3 ubiquitin-protein ligase RNF135

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022890, Cow)

Protein Percentage 73.48%
cDNA percentage 79.92%
Ka/Ks Ratio 0.56962 (Ka = 0.2026, Ks = 0.3556)

RNF135  (Minke Whale)

Gene Details

ring finger protein 135

External Links

Gene match (Identifier: BACU013932, Minke Whale)

Protein Percentage 47.06%
cDNA percentage 58.82%
Ka/Ks Ratio 0.89732 (Ka = 0.6201, Ks = 0.6911)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 798 bp    Location:567332..575048   Strand:+
>bmy_08847
GTTGTGGCGCAGAAGAGCATCACAGAAGTTGGCTGGGAGCTCGCAGAGCTGGTGGAACGGCTTATAGATATTGTCAGGAGCCTTCAGAGTCAGAGACATCTCCCAGAATCTGAACCAGACAATGAAATGAGCATCCTGGCTGTGGCTTTGTCAGATGGGGTGGACCTTTCCTTGGCTTCTCCAAAACTAGTGACTTCCAACACACCTGAGGGGAAAATGAGAGACATTCTCCATGACCTAGAAGAGATCCAGGAAAAATTACAAGAAAACTTCACGTGGAAAGAGGCCCTTGAAGAACAAATGCAGGGTTTGCTGTTGTTCCCTGGCTCAGGATTGAAAAACAGTTCACACCTGCCCCTTAGACAAGTGCTCTGGTCTCGCTTGCCTCTGCCTCCTGACTCGGCCACGGCCAGCTTTGCTCTCTCTTCTGGGCAGCAGTACTGGGAAGTGGACACTCAGCATTGTAGCCACTGGGCAGTTGGGGTGGCTTCCCGGGGGATGAGGCGTGACCAGACCCTGGGAAGGACCAGGAACTCCTGGTGTGTAGAGTGGAAAGGGACTAGCCAGCTCTCTGCATGGCACATGGTCAAGGAAACTGTCCTTGGCTCAAACAGACCTAGTGTGGTGGGCATCTGGCTGGACCTTGAGGAGGGAAAGCTTGCCTTCTATTCCATGGCTGATCAGGTGAAGCTCCTGTATGAGTGCCCAGTCTCTGCTGCCTTTCCTCTGCACCCTGCCTTCTGGCTGTATGGCTTRTTCCCTGGAAACTCTCTGACTATGAGGCAAATAAACGTATAA

Related Sequences

bmy_08847T0 Protein

Length: 266 aa      View alignments
>bmy_08847T0
VVAQKSITEVGWELAELVERLIDIVRSLQSQRHLPESEPDNEMSILAVALSDGVDLSLASPKLVTSNTPEGKMRDILHDLEEIQEKLQENFTWKEALEEQMQGLLLFPGSGLKNSSHLPLRQVLWSRLPLPPDSATASFALSSGQQYWEVDTQHCSHWAVGVASRGMRRDQTLGRTRNSWCVEWKGTSQLSAWHMVKETVLGSNRPSVVGIWLDLEEGKLAFYSMADQVKLLYECPVSAAFPLHPAFWLYGLFPGNSLTMRQINV*