Part of scaffold_406 (Scaffold)

For more information consult the page for scaffold_406 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RHOT1 ENSTTRG00000016428 (Bottlenosed dolphin)

Gene Details

ras homolog family member T1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015572, Bottlenosed dolphin)

Protein Percentage 96.37%
cDNA percentage 95.83%
Ka/Ks Ratio 0.10581 (Ka = 0.0039, Ks = 0.0372)

BT.38815 ENSBTAG00000010001 (Cow)

Gene Details

mitochondrial Rho GTPase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000035196, Cow)

Protein Percentage 98.99%
cDNA percentage 96.44%
Ka/Ks Ratio 0.03983 (Ka = 0.0055, Ks = 0.1389)

RHOT1  (Minke Whale)

Gene Details

ras homolog family member T1

External Links

Gene match (Identifier: BACU013933, Minke Whale)

Protein Percentage 98.99%
cDNA percentage 98.59%
Ka/Ks Ratio 0.15485 (Ka = 0.0058, Ks = 0.0375)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1491 bp    Location:600268..633883   Strand:+
>bmy_08848
ATGAAGGTTCCTCCCCGGGCAGAAGAAATCACCATTCCAGCTGATGTCACCCCTGAGAGAGTTCCAACGCACATTGTAGATTACTCAGAAGCAGAACAGAGTGATGAACAACTTCATCAAGAAATATCACAGGCGAATGTTATCTGCATAGTTTATGCTGTTAACAACAAGCATTCTATTGATAAGTGTTCAGCAAAAAATCTGAAGAACATATCAGAGCTCTTCTATTATGCACAGAAAGCTGTTCTTCATCCTACAGGGCCCCTGTACTGCCCAGAGGAGAAAGAGATGAAACCAGCCTGTATAAAAGCCCTTACTCGTATATTTAAAATATCTGATCAAGATAATGATGGTACTCTCAATGATGCTGAACTCAACTTCTTTCAGAGAATTTGTTTCAACACTCCGTTAGCTCCTCAAGCTCTGGAAGATGTCAAAAATGTAGTCAGAAAACATATAAGTGATGGTGTGGCTGACAGTGGATTGACACTGAAAGGTTTTCTTTTTTTACACACACTTTTTATTCAGAGAGGGAGACATGAAACTACTTGGACTGTGCTTCGACGATTTGGTTATGATGACGATCTGGATTTGACACCTGAATATTTATTTCCCTTGCTAAAAATACCTCCTGATTGCACTACTGAATTAAATCATCATGCATATTTGTTTCTCCAAAGTACTTTTGACAAGCATGATTTGGATAGAGACTGTGCTTTGTCACCTGATGAGCTTAAAGACTTGTTTAAAGTTTTCCCTTACATACCTTGGGGGCCAGATGTGAATAACACAGTTTGTACGAATGAAAAAGGCTGGATAACCTACCAGGGATTCCTTTCCCAGTGGACGCTCACGACCTATTTAGATGTGCAGCGGTGCCTGGAGTATTTGGGTTATCTAGGCTATTCAATATTGACTGAGCAAGAGTCTCAAGCTTCAGCCATCACAGTAACAAGAGATAAAAAGATAGACCTTCAGAAAAAACAGACTCAAAGAAATGTGTTCAGATGTAATGTAATTGGGATGAAAAACTGTGGGAAAAGTGGAGTTCTTCAGGCTCTTCTTGGAAGAAACTTAATGAGGCAGAAGAAAATTCGTGATGACCATAAATCATACTATGCGATTAACACTGTTTATGTATATGGACAAGAGAAATACTTGTTGTTGCATGATATCTCAGAATCGGAATTTCTAACTGAGGCTGAGATCCTTTGTGATGTTGTGTGCCTGGTATATGATGTCAGTAACCCTAAATCCTTTGAATACTGTGCCAGGATTTTTAAGCAACACTTTATGGACAGCAGAATACCTTGCTTAATCGTAGCTGCAAAGTCAGACCTGCATGAAGTCAAACAAGAATATAGCATTTCACCTACTGATTTCTGCAGGAAACACAAAATGCCTCCACCACAAGCCTTCACTTGCAATACTGCTGATGCACCCAGTAAAGATATCTTTGTTAAATTGACAACAATGGCCATGTACCCGTAA

Related Sequences

bmy_08848T0 Protein

Length: 497 aa      View alignments
>bmy_08848T0
MKVPPRAEEITIPADVTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKCSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVRKHISDGVADSGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLDLTPEYLFPLLKIPPDCTTELNHHAYLFLQSTFDKHDLDRDCALSPDELKDLFKVFPYIPWGPDVNNTVCTNEKGWITYQGFLSQWTLTTYLDVQRCLEYLGYLGYSILTEQESQASAITVTRDKKIDLQKKQTQRNVFRCNVIGMKNCGKSGVLQALLGRNLMRQKKIRDDHKSYYAINTVYVYGQEKYLLLHDISESEFLTEAEILCDVVCLVYDVSNPKSFEYCARIFKQHFMDSRIPCLIVAAKSDLHEVKQEYSISPTDFCRKHKMPPPQAFTCNTADAPSKDIFVKLTTMAMYP*